RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 TEX10Q9NXF1 929 aaPredicted RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 REV1Q9UBZ9 1251 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 ARID1BQ8NFD5 2236 aaPredicted RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 FAM170BA6NMN3 283 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 SNTNA6NMZ2 147 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 TIMP2P16035 220 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 ZNF30P17039 623 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 PNLIPRP1P54315 467 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 SMIM11AP58511 58 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 FABP5Q01469 135 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 KLHL12Q53G59 568 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 TJAP1Q5JTD0 557 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 ZER1Q7Z7L7 766 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 PEX5LQ8IYB4 626 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 OR6T1Q8NGN1 323 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 DOK4Q8TEW6 326 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 CXorf40BQ96DE9 158 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 TRMT2BQ96GJ1 504 aaKnown RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 FAM46AQ96IP4 442 aaKnown RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 PLA2G12AQ9BZM1 189 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 IL21Q9HBE4 155 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 FBXO9Q9UK97 447 aaPredicted RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 HS3ST2Q9Y278 367 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 TRAPPC4Q9Y296 219 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 PLA2G10O15496 165 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 GREM1O60565 184 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 MMP20O60882 483 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 SEMA7AO75326 666 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 IL1AP01583 271 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 C8AP07357 584 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 NCBP2P52298 156 aaKnown RBP eCLIP12.63□□□□□ -0.39
NCDN-201ENST00000356090 SMSP52788 366 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 ST8SIA6P61647 398 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 FAPQ12884 760 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 EFR3AQ14156 821 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 KRT33BQ14525 404 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 KLHL22Q53GT1 634 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 RFPL4BQ6ZWI9 263 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 KLBQ86Z14 1044 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 SDR16C5Q8N3Y7 309 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 DNAJC5GQ8N7S2 189 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 SIMC1Q8NDZ2 872 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 C11orf24Q96F05 449 aaPredicted RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 SLA2Q9H6Q3 261 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 SLC25A19Q9HC21 320 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 STMN3Q9NZ72 180 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 PLEKHB1Q9UF11 243 aaPredicted RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 FBXW2Q9UKT8 454 aa12.63□□□□□ -0.39
NCDN-201ENST00000356090 ZFR2Q9UPR6 939 aaKnown RBP12.63□□□□□ -0.39
NCDN-201ENST00000356090 NRG2O14511 850 aaPredicted RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 NOS1APO75052 506 aaPredicted RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 MSL3P1P0C860 447 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 GPR4P46093 362 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 RFX3P48380 749 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 PCBP3P57721 371 aaKnown RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 ASAH1Q13510 395 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ZNF750Q32MQ0 723 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ZNF717Q9BY31 904 aaPredicted RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 CAPN10Q9HC96 672 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 MAT2BQ9NZL9 334 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 EXTL2Q9UBQ6 330 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 STOML2Q9UJZ1 356 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 A0A0B4J293 547 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 SLC5A10A0PJK1 596 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 PLPP1O14494 284 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 SCO2O43819 266 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ORC5O43913 435 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 SRPRAP08240 638 aaKnown RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 TALDO1P37837 337 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 OPRD1P41143 372 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 SNRPGP62308 76 aaKnown RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 CAMKMTQ7Z624 323 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 TECPR1Q7Z6L1 1165 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 OR51G2Q8NGK0 314 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 UBE2E3Q969T4 207 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 RNF31Q96EP0 1072 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ZBED6CLQ96FA7 236 aaPredicted RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 PDXPQ96GD0 296 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ZNF354BQ96LW1 612 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 NKIRAS2Q9NYR9 191 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 P2RX2Q9UBL9 471 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 CSNK1G3Q9Y6M4 447 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 IQCMA0A1B0GVH7 501 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 BTN3A3O00478 584 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 PI15O43692 258 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 CPN2P22792 545 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ERP29P30040 261 aaKnown RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 IFNA8P32881 189 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 RPS5P46782 204 aaKnown RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 PRLHRP49683 370 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 HMGA2P52926 109 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 EEF1A2Q05639 463 aaKnown RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 ZNF33BQ06732 778 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 CAMK2BQ13554 666 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ZSWIM7Q19AV6 140 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 SLC27A4Q6P1M0 643 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms