RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 DVL1O14640 695 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 ZNF821O75541 412 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-201ENST00000356083 PTGER4P35408 488 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 AGTR2P50052 363 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 DVL1P1P54792 670 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-201ENST00000356083 PLEKHG7Q6ZR37 379 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 LEFTY2O00292 366 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 CREG1O75629 220 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 CSNK2A1P68400 391 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-201ENST00000356083 SYPL2Q5VXT5 272 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 CERS5Q8N5B7 392 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 ZFP41Q8N8Y5 198 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 CSNK2A3Q8NEV1 391 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 H1FXQ92522 213 aaKnown RBP16.49■□□□□ 0.23
COL27A1-201ENST00000356083 SECISBP2Q96T21 854 aaKnown RBP16.49■□□□□ 0.23
COL27A1-201ENST00000356083 SLC22A1O15245 554 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 CDK2P24941 298 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 SHMT2P34897 504 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 GPR33Q49SQ1 333 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 LEG1Q6P5S2 330 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 MOV10Q9HCE1 1003 aaKnown RBP16.49■□□□□ 0.23
COL27A1-201ENST00000356083 SMCO4Q9NRQ5 59 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 DTLQ9NZJ0 730 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 NKPD1Q17RQ9 610 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 ASRGL1Q7L266 308 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 ZDHHC2Q9UIJ5 367 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 AHCTF1Q8WYP5 2266 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 A0A0D9SEW6 157 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 AGPAT2O15120 278 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 SLC7A4O43246 635 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 ITM2AO43736 263 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 NIPAL3Q6P499 406 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 GPR155Q7Z3F1 870 aa16.49■□□□□ 0.23
COL27A1-201ENST00000356083 MEIS3P1A6NDR6 274 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 LEFTY1O75610 366 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 HHEXQ03014 270 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 ASPGQ86U10 573 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 OR2T33Q8NG76 320 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 OR5L2Q8NGL0 311 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 ARNT2Q9HBZ2 717 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 RNGTTO60942 597 aaKnown RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 HLA-DPB1P04440 258 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 RAB6AP20340 208 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 STK19P49842 368 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 CARM1Q86X55 608 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 ACBD4Q8NC06 268 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 CANT1Q8WVQ1 401 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 SLAMF9Q96A28 289 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 SFXN2Q96NB2 322 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 ZNF160Q9HCG1 818 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 MYNNQ9NPC7 610 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 ADGRB3O60242 1522 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 A8MXE2 369 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 ETV3P41162 512 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 ASPAP45381 313 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 GRB7Q14451 532 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 SLC10A6Q3KNW5 377 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 CMTM1Q8IZ96 169 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 CREB3L1Q96BA8 519 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 FAM46AQ96IP4 442 aaKnown RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 HNRNPABQ99729 332 aaKnown RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 TP63Q9H3D4 680 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 TFB2MQ9H5Q4 396 aaKnown RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 UBQLN2Q9UHD9 624 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 G6PDP11413 515 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 PXKQ7Z7A4 578 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 C9orf43Q8TAL5 461 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 DECR2Q9NUI1 292 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 TMEM184BQ9Y519 407 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 WASH4PA8MWX3 477 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 NCS1P62166 190 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 FGL2Q14314 439 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 LCN10Q6JVE6 187 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 E9PCH4 1651 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 MTMR11A4FU01 709 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 TAS2R43P59537 309 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 DAG1Q14118 895 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 SLC35G1Q2M3R5 365 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 LRIG1Q96JA1 1093 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 HSH2DQ96JZ2 352 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 TTYH3Q9C0H2 523 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 KCMF1Q9P0J7 381 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 TESQ9UGI8 421 aaKnown RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 POMPQ9Y244 141 aa16.48■□□□□ 0.23
COL27A1-201ENST00000356083 PTRH2Q9Y3E5 179 aaKnown RBP16.48■□□□□ 0.23
COL27A1-201ENST00000356083 MEIS3P2A8K0S8 358 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 ZNF705GA8MUZ8 300 aaPredicted RBP16.47■□□□□ 0.23
COL27A1-201ENST00000356083 DLGAP1O14490 977 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 GMDSO60547 372 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 ARHGAP19Q14CB8 494 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 C22orf42Q6IC83 251 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 RSC1A1Q92681 617 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 FAM173AQ9BQD7 235 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 PRMT2P55345 433 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 RPS26P62854 115 aaKnown RBP16.47■□□□□ 0.23
COL27A1-201ENST00000356083 REEP3Q6NUK4 255 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 NRROSQ86YC3 692 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 FAM46BQ96A09 425 aa16.47■□□□□ 0.23
COL27A1-201ENST00000356083 OR14A2Q96R54 314 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms