RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 RXFP3Q9NSD7 469 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 ZNF358Q9NW07 568 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 SBF1O95248 1867 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 CD40LGP29965 261 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 PCBD1P61457 104 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TMEM214Q6NUQ4 689 aaKnown RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 LRRN1Q6UXK5 716 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 ZNF765Q7L2R6 523 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 AGAP11Q8TF27 550 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TMEM41AQ96HV5 264 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 OR5B2Q96R09 309 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 AIFM2Q9BRQ8 373 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 HCAR1Q9BXC0 346 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TRPV4Q9HBA0 871 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 MEPEQ9NQ76 525 aaPredicted RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 DNMT3BQ9UBC3 853 aaKnown RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 ICKQ9UPZ9 632 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 WASH4PA8MWX3 477 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 PET100P0DJ07 73 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 F3P13726 295 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 GRIA1P42261 906 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 MVKQ03426 396 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 PLEKHN1Q494U1 663 aaPredicted RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 SPANXN4Q5MJ08 99 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 CRTC1Q6UUV9 634 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 VWA5B2Q8N398 1253 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 BORCS5Q969J3 196 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TMEM80Q96HE8 168 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 METTL2AQ96IZ6 378 aaKnown RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 ERMAPQ96PL5 475 aaPredicted RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 SLC12A9Q9BXP2 914 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 ZBP1Q9H171 429 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TMEM9BQ9NQ34 198 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 STOML2Q9UJZ1 356 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 PCDHB10Q9UN67 800 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 DHDHQ9UQ10 334 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 KCTD3Q9Y597 815 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 LOC100130705A0A1B0GUX0 176 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 ABLIM1O14639 778 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 KLF11O14901 512 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 IL3P08700 152 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 BCKDHAP12694 445 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 POU3F2P20265 443 aaPredicted RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 CLDN2P57739 230 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TRA2BP62995 288 aaKnown RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 C6orf52Q5T4I8 152 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 EPGNQ6UW88 154 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TEX19Q8NA77 164 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 OR13C3Q8NGS6 347 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 OR6N2Q8NGY6 317 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 DOHHQ9BU89 302 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 PGAP2Q9UHJ9 254 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 PFDN2Q9UHV9 154 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 CAMK2AQ9UQM7 478 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 KCNIP3Q9Y2W7 256 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 COMMD3-BMI1R4GMX3 469 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 FABP12A6NFH5 140 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 CD3GP09693 182 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 EGFLAMQ63HQ2 1017 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 CARM1Q86X55 608 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 MCATQ8IVS2 390 aaKnown RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 OR14A16Q8NHC5 309 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 RAB2BQ8WUD1 216 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 LRTOMTQ8WZ04 291 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 FBXL8Q96CD0 374 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 NECAB3Q96P71 396 aaPredicted RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 SCP2D1Q9UJQ7 156 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 OR7A10O76100 309 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 CFL1P23528 166 aaKnown RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 ERVFC1P60507 584 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 GRIK2Q13002 908 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 BCL2L15Q5TBC7 163 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TMEFF1Q8IYR6 380 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 ZNF619Q8N2I2 560 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TTC9BQ8N6N2 239 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 SNRNP27Q8WVK2 155 aaKnown RBP10.73□□□□□ -0.69
FN1-204ENST00000356005 GAL3ST3Q96A11 431 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TBC1D20Q96BZ9 403 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 TLCD1Q96CP7 247 aa10.73□□□□□ -0.69
FN1-204ENST00000356005 UNC119BA6NIH7 251 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 CXorf49A8MYA2 514 aaPredicted RBP10.72□□□□□ -0.69
FN1-204ENST00000356005 K7ERQ8 282 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 SLC33A1O00400 549 aaPredicted RBP10.72□□□□□ -0.69
FN1-204ENST00000356005 MT-ND1P03886 318 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 ZNF16P17020 682 aaPredicted RBP10.72□□□□□ -0.69
FN1-204ENST00000356005 SHHQ15465 462 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 C4orf46Q504U0 113 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 CNEP1R1Q8N9A8 125 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 OR2T4Q8NH00 348 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 MED11Q9P086 117 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 ABRACLQ9P1F3 81 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 ERVK-18Q9QC07 812 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 SALL4Q9UJQ4 1053 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 PI4KAP42356 2102 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 CLPXO76031 633 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 CBLP22681 906 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 RNASE12Q5GAN4 147 aaKnown RBP10.72□□□□□ -0.69
FN1-204ENST00000356005 ANKRD26P1Q6NSI1 321 aa10.72□□□□□ -0.69
FN1-204ENST00000356005 CDRT4Q8N9R6 151 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms