RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 HOXC13P31276 330 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 ARSDP51689 593 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 FOXK2Q01167 660 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 FABP5Q01469 135 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 VGLL4Q14135 290 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 CD200R1LQ6Q8B3 271 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 GSG1LQ6UXU4 331 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 VSIG10LQ86VR7 867 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 PTOV1Q86YD1 416 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 CMIPQ8IY22 773 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 OXR1Q8N573 874 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 OR56B4Q8NH76 319 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 RPLP0P6Q8NHW5 317 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 RXFP4Q8TDU9 374 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 MOGAT1Q96PD6 335 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 IL4I1Q96RQ9 567 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 GSDMCQ9BYG8 508 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 CHIAQ9BZP6 476 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 ELP3Q9H9T3 547 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 JPH1Q9HDC5 661 aaPredicted RBP14.92□□□□□ -0.02
RTN3-205ENST00000356000 NPDC1Q9NQX5 325 aaPredicted RBP14.92□□□□□ -0.02
RTN3-205ENST00000356000 TAS2R3Q9NYW6 316 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 TREM2Q9NZC2 230 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 AKAP7Q9P0M2 348 aaPredicted RBP14.92□□□□□ -0.02
RTN3-205ENST00000356000 FEM1BQ9UK73 627 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 ALPK3Q96L96 1907 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 POM121BA6NF01 834 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 OR51F1A6NGY5 319 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 GABRDO14764 452 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 EEF1E1O43324 174 aaKnown RBP14.92□□□□□ -0.02
RTN3-205ENST00000356000 LCMT2O60294 686 aaKnown RBP14.92□□□□□ -0.02
RTN3-205ENST00000356000 SEMA7AO75326 666 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 SERPINA3P01011 423 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 CBSLP0DN79 551 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 CBR1P16152 277 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 CBSP35520 551 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 TPBGQ13641 420 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 HABP2Q14520 560 aaPredicted RBP14.92□□□□□ -0.02
RTN3-205ENST00000356000 SEC23BQ15437 767 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 ALKAL1Q6UXT8 129 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 SSX9Q7RTT3 188 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 SLC43A2Q8N370 569 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 SLC44A3Q8N4M1 653 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 BRI3BPQ8WY22 251 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 KAT2AQ92830 837 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 OR4K3Q96R72 315 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 ENKD1Q9H0I2 346 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 ZFP57Q9NU63 452 aa14.92□□□□□ -0.02
RTN3-205ENST00000356000 RPL36Q9Y3U8 105 aaKnown RBP14.92□□□□□ -0.02
RTN3-205ENST00000356000 I6L893 689 aaPredicted RBP14.91□□□□□ -0.02
RTN3-205ENST00000356000 FZD7O75084 574 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 NCR1O76036 304 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 GIPP09681 153 aaPredicted RBP14.91□□□□□ -0.02
RTN3-205ENST00000356000 ALPIP09923 528 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 GAAP10253 952 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 RFX3P48380 749 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 TAS2R60P59551 318 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 RAB5BP61020 215 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 ALKBH1Q13686 389 aaKnown RBP14.91□□□□□ -0.02
RTN3-205ENST00000356000 ERV3-1Q14264 604 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 C4orf46Q504U0 113 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 DEF8Q6ZN54 512 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 SLC9B2Q86UD5 537 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 RNF113BQ8IZP6 322 aaKnown RBP14.91□□□□□ -0.02
RTN3-205ENST00000356000 SPAG16Q8N0X2 631 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 NTAN1Q96AB6 310 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 SLC6A18Q96N87 628 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 TINF2Q9BSI4 451 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 DUSP16Q9BY84 665 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 TDRD3Q9H7E2 651 aaKnown RBP14.91□□□□□ -0.02
RTN3-205ENST00000356000 PLEKHM1Q9Y4G2 1056 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 AGAP14A8MT82 685 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 CCL22O00626 93 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 SLC31A2O15432 143 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 LRRTM2O43300 516 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 SLC28A2O43868 658 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 PRAMEF2O60811 474 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 AQP8O94778 261 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 TYRP14679 529 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 VIPR1P32241 457 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 CRISP1P54107 249 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 RNF4P78317 190 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 SCAPQ12770 1279 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 TMEM255AQ5JRV8 349 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 ANKRD46Q86W74 232 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 OR9Q2Q8NGE9 314 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 OR52J3Q8NH60 311 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 WNT8BQ93098 351 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 ORAI1Q96D31 301 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 AARSD1Q9BTE6 412 aaKnown RBP14.91□□□□□ -0.02
RTN3-205ENST00000356000 C11orf49Q9H6J7 331 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 BARX1Q9HBU1 254 aaPredicted RBP14.91□□□□□ -0.02
RTN3-205ENST00000356000 ASIC5Q9NY37 505 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 DNAJC27Q9NZQ0 273 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 RPS6KB2Q9UBS0 482 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 RAI2Q9Y5P3 530 aa14.91□□□□□ -0.02
RTN3-205ENST00000356000 TRDV1A0A1B0GX56 115 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 A0A1W2PPC1 479 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 PHYHO14832 338 aa14.9□□□□□ -0.02
RTN3-205ENST00000356000 STX11O75558 287 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms