RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 UPK1AO00322 258 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 PLOD3O60568 738 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 PGRP06401 933 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 CD97P48960 835 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 EMDP50402 254 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 POLR2JP52435 117 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 HBA1P69905 142 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 NNATQ16517 81 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 ABHD17BQ5VST6 288 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 SZRD1Q7Z422 152 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 FUNDC1Q8IVP5 155 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 BEST3Q8N1M1 668 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 OR7G1Q8NGA0 311 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 C9orf43Q8TAL5 461 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 VPS33AQ96AX1 596 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 OR52E6Q96RD3 313 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 WWTR1Q9GZV5 400 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 ZNF385DQ9H6B1 395 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 SIRT3Q9NTG7 399 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 DDX18Q9NVP1 670 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 MYOTQ9UBF9 498 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 CSAG2Q9Y5P2 127 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 ATRXP46100 2492 aa16.58■□□□□ 0.24
PDLIM7-202ENST00000355841 ZNF354AO60765 605 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 OR2J2O76002 312 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 CPSF4O95639 269 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 ALPPP05187 535 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 PRKAG1P54619 331 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 MLF1P58340 268 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 SQLEQ14534 574 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 EBPQ15125 230 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 DPY19L1Q2PZI1 675 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 TIGD2Q4W5G0 525 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 AGKQ53H12 422 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 SLC29A4Q7RTT9 530 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 WDR53Q7Z5U6 358 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 CLEC4FQ8N1N0 589 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 OR2L13Q8N349 312 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 GLB1L3Q8NCI6 653 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 OR5P2Q8WZ92 322 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 ZNF354BQ96LW1 612 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 NSRP1Q9H0G5 558 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 CXorf36Q9H7Y0 433 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 EQTNQ9NQ60 294 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 TEKT2Q9UIF3 430 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 RALYQ9UKM9 306 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 IGSF10Q6WRI0 2623 aa16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 SMG1Q96Q15 3661 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-202ENST00000355841 C2orf92A0A1B0GVN3 265 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 FAM234BA2RU67 622 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 PLOD2O00469 737 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 RNASET2O00584 256 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 PRAMEF2O60811 474 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 ITGA10O75578 1167 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 WDPCPO95876 746 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 ATP4BP51164 291 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 MFAP5Q13361 173 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 UBAP2LQ14157 1087 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 MLC1Q15049 377 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 MEP1AQ16819 746 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 COLEC12Q5KU26 742 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 ZNF468Q5VIY5 522 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 METTL21CQ5VZV1 264 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 ASB18Q6ZVZ8 466 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 OR4A15Q8NGL6 344 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 OR8K3Q8NH51 312 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 OR5AK3PQ8NH89 298 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 INPP5KQ9BT40 448 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 ITPAQ9BY32 194 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 TRIM4Q9C037 500 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 ADNPQ9H2P0 1102 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.56■□□□□ 0.247e-8■■■■■ 55
PDLIM7-202ENST00000355841 C19orf53Q9UNZ5 99 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 A0A087WV62 115 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 PRSS51A0A1B0GVH4 220 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 OR6C76A6NM76 312 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 NR5A2O00482 541 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 SNX3O60493 162 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 IL6P05231 212 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 MRPL19P49406 292 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 ANXA8L1Q5VT79 327 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 TMEM64Q6YI46 380 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 NATD1Q8N6N6 113 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 OR5L2Q8NGL0 311 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 ADIPOR1Q96A54 375 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 FAM120BQ96EK7 910 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 MFRPQ9BY79 579 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 EPN3Q9H201 632 aa16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 FAM120CQ9NX05 1096 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 HEMK1Q9Y5R4 338 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-202ENST00000355841 SPENQ96T58 3664 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 SOAT1P35610 550 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 NR0B1P51843 470 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 CORO7P57737 925 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 SPDYE7PQ495Y7 208 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 VPS26BQ4G0F5 336 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 LACTB2Q53H82 288 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 HLA-DQA1Q5Y7H0 255 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 BLOC1S3Q6QNY0 202 aa16.55■□□□□ 0.24
PDLIM7-202ENST00000355841 GK5Q6ZS86 529 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms