RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SPACA6W5XKT8 324 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CCL16O15467 120 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 KERAO60938 352 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 RHOBTB1O94844 696 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 SNX4O95219 450 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 C6orf47O95873 294 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 SETSIPP0DME0 302 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 MMP11P24347 488 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 POU1F1P28069 291 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ABCD1P33897 745 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 RPS13P62277 151 aaKnown RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 ACOX1Q15067 660 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 TMEM52BQ4KMG9 183 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 FAM98BQ52LJ0 330 aaKnown RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 YOD1Q5VVQ6 348 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 IGF2-ASQ6U949 168 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 NHLRC1Q6VVB1 395 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ZNF621Q6ZSS3 439 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CBARPQ8N350 705 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 SLC13A3Q8WWT9 602 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 BSCL2Q96G97 398 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 CENPNQ96H22 339 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 HSH2DQ96JZ2 352 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 EIF2B3Q9NR50 452 aaKnown RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 VPS28Q9UK41 221 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 C2orf72A6NCS6 295 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 OR6C75A6NL08 312 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CLIC1O00299 241 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 PEX12O00623 359 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 LIN7AO14910 233 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 COQ9O75208 318 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 TNFRSF21O75509 655 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CDC123O75794 336 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 SLC2A3P11169 496 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 PTPN2P17706 415 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ELAVL2Q12926 359 aaKnown RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 DAG1Q14118 895 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 GSTA3Q16772 222 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 CTXN3Q4LDR2 81 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 PXDC1Q5TGL8 231 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 SLCO6A1Q86UG4 719 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ZDHHC21Q8IVQ6 265 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 OR52P1PQ8NH57 321 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 ASB11Q8WXH4 323 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 KLHL6Q8WZ60 621 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 RGP1Q92546 391 aaPredicted RBP5.25□□□□□ -1.57
CD47-201ENST00000355354 UCKL1Q9NWZ5 548 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 PLA2G2EQ9NZK7 142 aa5.25□□□□□ -1.57
CD47-201ENST00000355354 A0A087WUU8 490 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 A0A0A6YYC8 382 aaPredicted RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 I3L1I5 382 aaPredicted RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 LGALS8O00214 317 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 FPGTO14772 594 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 PENKP01210 267 aaPredicted RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 URODP06132 367 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 ATICP31939 592 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 GRK3P35626 688 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 AVPR1BP47901 424 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 OR10K2Q6IF99 312 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 PRMT9Q6P2P2 845 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 C19orf48Q6RUI8 117 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 PDZD3Q86UT5 571 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 SIRT6Q8N6T7 355 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 OR4C15Q8NGM1 316 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 OSCP1Q8WVF1 389 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 ZBTB18Q99592 522 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 PDCD1LG2Q9BQ51 273 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 ZYG11BQ9C0D3 744 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 NMNAT1Q9HAN9 279 aaPredicted RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 IL1RAPQ9NPH3 570 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 SEMA4GQ9NTN9 838 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 C6orf203Q9P0P8 240 aaPredicted RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 MGAT4BQ9UQ53 548 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 CFAP99D6REC4 459 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 TBL1XO60907 577 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 ANGPTL1O95841 491 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 PLGP00747 810 aaPredicted RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 PRB4P10163 310 aaPredicted RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 PSMB9P28065 219 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 SLC6A12P48065 614 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 RPIAP49247 311 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 NR1H2P55055 460 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 DCTN2Q13561 401 aaKnown RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 GTF2H2Q13888 395 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 TRMT12Q53H54 448 aaKnown RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 ATAD3BQ5T9A4 648 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 INTS11Q5TA45 600 aaKnown RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 GTF2H2CQ6P1K8 395 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 CBLN3Q6UW01 205 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 TRILQ7L0X0 811 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 ROBO4Q8WZ75 1007 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 ITFG2Q969R8 447 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 GFM1Q96RP9 751 aaKnown RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 FUZQ9BT04 418 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 NRSN2Q9GZP1 204 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 C11orf54Q9H0W9 315 aaPredicted RBP5.24□□□□□ -1.57
CD47-201ENST00000355354 FN3KQ9H479 309 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 MKLN1Q9UL63 735 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 TLR6Q9Y2C9 796 aa5.24□□□□□ -1.57
CD47-201ENST00000355354 PMS2P1A4D2B8 440 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms