RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 OR52N1Q8NH53 320 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 KIAA1191Q96A73 305 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SORBS1Q9BX66 1292 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 TCEAL2Q9H3H9 227 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 MFSD1Q9H3U5 465 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 IMP3Q9NV31 184 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 C14orf166Q9Y224 244 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 CACNA1GO43497 2377 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 TRBC2A0A5B9 178 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CATP04040 527 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 CSF3P09919 207 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 GPX3P22352 226 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 MASP1P48740 699 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 DIO3P55073 304 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ACTA2P62736 377 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ACTG2P63267 376 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ZNF33AQ06730 810 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 RAB40BQ12829 278 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CHIT1Q13231 466 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 RBMS2Q15434 407 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 ARHGAP40Q5TG30 622 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 LPCAT3Q6P1A2 487 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ZNF627Q7L945 461 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 KANSL1Q7Z3B3 1105 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PLEKHH3Q7Z736 793 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 FAM217AQ8IXS0 508 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 IL17RCQ8NAC3 791 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CHST4Q8NCG5 386 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 TMEM163Q8TC26 289 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 RNF31Q96EP0 1072 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 TMEM43Q9BTV4 400 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 AP5M1Q9H0R1 490 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SLC25A51Q9H1U9 297 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 C11orf49Q9H6J7 331 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 FBRSL1Q9HCM7 1045 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 ASAH2Q9NR71 780 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 EVA1BQ9NVM1 165 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PCDHB7Q9Y5E2 793 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 A0A087X0M5 115 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PIGBOS1A0A0B4J2F0 54 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 A0A1B0GX30 115 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PQLC2LA1A4F0 135 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ACKR2O00590 384 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ARHGAP33O14559 1287 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 LATS1O95835 1130 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 HLA-DQA2P01906 255 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ANXA4P09525 319 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 TXNP10599 105 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 OR3A2P47893 321 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 MTNR1AP48039 350 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ISL1P61371 349 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 TLE4Q04727 773 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 HNF4GQ14541 408 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 LEXMQ3ZCV2 418 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 LINGO4Q6UY18 593 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 LDB1Q86U70 411 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 RANBP3LQ86VV4 465 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 ARFGAP1Q8N6T3 406 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 OR2AP1Q8NGE2 309 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PRR7Q8TB68 274 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PGAP3Q96FM1 320 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 OR14A2Q96R54 314 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 NPAS1Q99742 590 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SLX1AQ9BQ83 275 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 KXD1Q9BQD3 176 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ABRACLQ9P1F3 81 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 LRFN2Q9ULH4 789 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 V9GYS6 101 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PTP4A3O75365 173 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ATG12O94817 140 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 UBL3O95164 117 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 HIST1H2ABP04908 130 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SLC35E2BP0CK96 405 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 NAGAP17050 411 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 EFNA1P20827 205 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 AQP6Q13520 282 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ZNF792Q3KQV3 632 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 TMEM41BQ5BJD5 291 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CELF3Q5SZQ8 465 aaKnown RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 EFCAB12Q6NXP0 572 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 HIST3H2AQ7L7L0 130 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 BTLAQ7Z6A9 289 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 TMEM135Q86UB9 458 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 HIST1H2ACQ93077 130 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 CCNL2Q96S94 520 aaPredicted RBP4.81□□□□□ -1.64
SKP1-202ENST00000353411 GPR21Q99679 349 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 EDEM2Q9BV94 578 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SRRQ9GZT4 340 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 VNN3Q9NY84 501 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SLCO3A1Q9UIG8 710 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 FBXO10Q9UK96 956 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 ARL5AQ9Y689 179 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SCN5AQ14524 2016 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SEPT4O43236 478 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 AOC2O75106 756 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 RD3LP0DJH9 198 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 SPNP16150 400 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 RBP2P50120 134 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 C1QTNF8P60827 252 aa4.81□□□□□ -1.64
SKP1-202ENST00000353411 PKIAP61925 76 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms