RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 DDAH2O95865 285 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 RPS15P62841 145 aaKnown RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 KCNJ2P63252 427 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 RGNQ15493 299 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 SAMD4BQ5PRF9 694 aaKnown RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 UTP4Q969X6 686 aaKnown RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 MCUR1Q96AQ8 359 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 SENP5Q96HI0 755 aaPredicted RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 FBXL20Q96IG2 436 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 WDR77Q9BQA1 342 aaPredicted RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 SCNM1Q9BWG6 230 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 SERHL2Q9H4I8 314 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 PACSIN3Q9UKS6 424 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 PCDHGA6Q9Y5G7 932 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 CLCA3PQ9Y6N3 262 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 A8MUA0 341 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 CLPSP04118 112 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 GZMMP51124 257 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 PGDP52209 483 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 EEFSECP57772 596 aaKnown RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 RPS18P62269 152 aaKnown RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 EXOSC7Q15024 291 aaKnown RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 SPATS1Q496A3 300 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 COX20Q5RI15 118 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.23■■□□□ 1.637e-7■■■■■ 53.6
SSBP4-202ENST00000348495 CPEB2Q7Z5Q1 589 aaKnown RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 CALHM3Q86XJ0 350 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 DAZLQ92904 295 aaKnown RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 ZNF583Q96ND8 569 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 MS4A4EQ96PG1 132 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 C19orf25Q9UFG5 118 aaPredicted RBP25.23■■□□□ 1.63
SSBP4-202ENST00000348495 ERVK-19Q9WJR5 959 aa25.23■■□□□ 1.63
SSBP4-202ENST00000348495 IGHV3-20A0A0C4DH32 117 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 IGHEP01854 428 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 IGKV3-11P04433 115 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 HMGN2P05204 90 aaKnown RBP25.22■■□□□ 1.63
SSBP4-202ENST00000348495 MMP11P24347 488 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 SSTR4P31391 388 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 PRKAG1P54619 331 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 LIPEQ05469 1076 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 FADDQ13158 208 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 C6orf163Q5TEZ5 329 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 SZRD1Q7Z422 152 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 ULK2Q8IYT8 1036 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 OR10A6Q8NH74 314 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 MIPOL1Q8TD10 442 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 ECSITQ9BQ95 431 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 CNPPD1Q9BV87 410 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 RAD21L1Q9H4I0 556 aa25.22■■□□□ 1.63
SSBP4-202ENST00000348495 GMPR2Q9P2T1 348 aaKnown RBP25.22■■□□□ 1.63
SSBP4-202ENST00000348495 PPIEQ9UNP9 301 aaKnown RBP25.22■■□□□ 1.63
SSBP4-202ENST00000348495 A0A1W2PQ72 361 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 ANKRD65E5RJM6 399 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 LIPCP11150 499 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 SPINK2P20155 84 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 MAGEA8P43361 318 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 RPS26P62854 115 aaKnown RBP25.21■■□□□ 1.63
SSBP4-202ENST00000348495 EXOSC6Q5RKV6 272 aaKnown RBP25.21■■□□□ 1.63
SSBP4-202ENST00000348495 ANGPTL8Q6UXH0 198 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 SERPINA11Q86U17 422 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 RNF148Q8N7C7 305 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 ZNF615Q8N8J6 731 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 OR7G1Q8NGA0 311 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 OR52R1Q8NGF1 315 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 SLC2A12Q8TD20 617 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 HS3ST3B1Q9Y662 390 aa25.21■■□□□ 1.63
SSBP4-202ENST00000348495 DYRK3O43781 588 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 HSD17B1P14061 328 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 GSK3BP49841 420 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 GPR143P51810 404 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 CASP9P55211 416 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 LASP1Q14847 261 aaKnown RBP25.2■■□□□ 1.63
SSBP4-202ENST00000348495 MFSD12Q6NUT3 480 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 FBXW8Q8N3Y1 598 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 MORN4Q8NDC4 146 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 NFAM1Q8NET5 270 aaPredicted RBP25.2■■□□□ 1.63
SSBP4-202ENST00000348495 ZNF721Q8TF20 911 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 C8orf44Q96CB5 159 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 SLC35G5Q96KT7 338 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 ALG2Q9H553 416 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 KCND3Q9UK17 655 aa25.2■■□□□ 1.63
SSBP4-202ENST00000348495 SAGE2PA6NJ88 616 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 DNAJA2O60884 412 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 NME6O75414 186 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-202ENST00000348495 TNFRSF21O75509 655 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 BCAS2O75934 225 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-202ENST00000348495 PDE5AO76074 875 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 BMP2P12643 396 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 HOXD11P31277 338 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-202ENST00000348495 MAN2A2P49641 1150 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 EMDP50402 254 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 SSPNQ14714 243 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 TBC1D25Q3MII6 688 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 NET1Q7Z628 596 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-202ENST00000348495 IL22RA1Q8N6P7 574 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 ZNF321PQ8N8H1 164 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 HOXB13Q92826 284 aaPredicted RBP25.2■■□□□ 1.62
SSBP4-202ENST00000348495 C16orf58Q96GQ5 468 aa25.2■■□□□ 1.62
SSBP4-202ENST00000348495 COQ9O75208 318 aa25.19■■□□□ 1.62
SSBP4-202ENST00000348495 SORBS2O94875 1100 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms