RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CDH10Q9Y6N8 788 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 ATG2AQ2TAZ0 1938 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 IGLV3-16A0A075B6K0 115 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 TUBAL3A6NHL2 446 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 HEPACAM2A8MVW5 462 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 PRKYO43930 277 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 GPR37L1O60883 481 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 OR7A10O76100 309 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 DHFRP00374 187 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 TPOP07202 933 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 FHP07954 510 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 C1SP09871 688 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 VIPR2P41587 438 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 RAE1P78406 368 aaKnown RBP15.03■□□□□ -0
HMGA1-202ENST00000347617 ADAM15Q13444 863 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 XKR6Q5GH73 641 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 DCST1Q5T197 706 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 ZNF648Q5T619 568 aaPredicted RBP15.03■□□□□ -0
HMGA1-202ENST00000347617 ANGPTL8Q6UXH0 198 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 CD300LDQ6UXZ3 194 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 GLRX5Q86SX6 157 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 KIF18BQ86Y91 864 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 RADILQ96JH8 1075 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 C17orf62Q9BQA9 187 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 ABCG8Q9H221 673 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 SPNS1Q9H2V7 528 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 ZDHHC6Q9H6R6 413 aa15.03■□□□□ -0
HMGA1-202ENST00000347617 SPIN1Q9Y657 262 aaPredicted RBP15.03■□□□□ -0
HMGA1-202ENST00000347617 PRAMEF33A0A0G2JMD5 474 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 NPIPB15A6NHN6 443 aaPredicted RBP15.02□□□□□ -0.01
HMGA1-202ENST00000347617 SH3BP5O60239 455 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 PRAMEF10O60809 474 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 PRAMEF4O60810 478 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 TNNI3P19429 210 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 GALP22466 123 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 LHCGRP22888 699 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 PTGS2P35354 604 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 PFN3P60673 137 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 ST8SIA6P61647 398 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 RAB40BQ12829 278 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 PRAMEF9Q5VWM5 478 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 ANKRD54Q6NXT1 300 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 TEX261Q6UWH6 196 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 Q6ZVU0 165 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 PRICKLE2Q7Z3G6 844 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 CDH24Q86UP0 819 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 RASGRP3Q8IV61 690 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 GPALPP1Q8IXQ4 340 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 TP53I13Q8NBR0 393 aaPredicted RBP15.02□□□□□ -0.01
HMGA1-202ENST00000347617 OR52I1Q8NGK6 324 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 UPRTQ96BW1 309 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 ASIC4Q96FT7 647 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 ACAT2Q9BWD1 397 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 MAT2BQ9NZL9 334 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 NFKBIL1Q9UBC1 381 aaPredicted RBP15.02□□□□□ -0.01
HMGA1-202ENST00000347617 NLKQ9UBE8 527 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 TESQ9UGI8 421 aaKnown RBP15.02□□□□□ -0.01
HMGA1-202ENST00000347617 SLC23A1Q9UHI7 598 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 MOSPD1Q9UJG1 213 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 SF3B6Q9Y3B4 125 aaKnown RBP15.02□□□□□ -0.01
HMGA1-202ENST00000347617 U3KQ87 197 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 PCM1Q15154 2024 aa15.02□□□□□ -0.01
HMGA1-202ENST00000347617 J3KTA2 159 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 QSOX1O00391 747 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 SNAPC5O75971 98 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 IFNA7P01567 189 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 CLEC2LP0C7M8 214 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 APEX1P27695 318 aaKnown RBP15.01□□□□□ -0.01
HMGA1-202ENST00000347617 CCR7P32248 378 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 CHI3L1P36222 383 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-202ENST00000347617 TALDO1P37837 337 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 PTSQ03393 145 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 PDE7AQ13946 482 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 IL18Q14116 193 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 PTPRRQ15256 657 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 ZXDCQ2QGD7 858 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-202ENST00000347617 COX20Q5RI15 118 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 FAAH2Q6GMR7 532 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 TMEM107Q6UX40 140 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 TRILQ7L0X0 811 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 LUZP2Q86TE4 346 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF431Q8TF32 576 aaPredicted RBP15.01□□□□□ -0.01
HMGA1-202ENST00000347617 C1GALT1C1Q96EU7 318 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 SLC6A18Q96N87 628 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 POLR2J3Q9H1A7 115 aaKnown RBP15.01□□□□□ -0.01
HMGA1-202ENST00000347617 MED28Q9H204 178 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 GPATCH2Q9NW75 528 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 ZSCAN32Q9NX65 697 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 DEC1Q9P2X7 70 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 POLHQ9Y253 713 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 NCKAP1Q9Y2A7 1128 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 C2orf16Q68DN1 1984 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 BTN3A3O00478 584 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 RAF1P04049 648 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 FCARP24071 287 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 BMP8BP34820 402 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 MAPK9P45984 424 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 DCDC1P59894 354 aa15.01□□□□□ -0.01
HMGA1-202ENST00000347617 SRP54P61011 504 aaKnown RBP15.01□□□□□ -0.01
HMGA1-202ENST00000347617 SNRPD2P62316 118 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms