RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SEMA4GQ9NTN9 838 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 CES1P1Q9UKY3 287 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 GPC6Q9Y625 555 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 A0A087WUU8 490 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 A0A0B4J293 547 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TBC1D3BA6NDS4 549 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 KPNA4O00629 521 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 MAN2B1O00754 1011 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PDPK1O15530 556 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ERAL1O75616 437 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 NCR1O76036 304 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 CH25HO95992 272 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 FGBP02675 491 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 HMGN2P05204 90 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 CEACAM5P06731 702 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 GLULP15104 373 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TBXA2RP21731 343 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 AZGP1P25311 298 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 GJA4P35212 333 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 REEP5Q00765 189 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PLAURQ03405 335 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 CHRNEQ04844 493 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 RBBP4Q09028 425 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 LASP1Q14847 261 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ARHGAP15Q53QZ3 475 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 SYT14P1Q58G82 188 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 VASNQ6EMK4 673 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 OR4C11Q6IEV9 310 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 KIAA1161Q6NSJ0 714 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PLBD1Q6P4A8 553 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 FAM111BQ6SJ93 734 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PRSS41Q7RTY9 318 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 IQCHQ86VS3 1027 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 NKAIN4Q8IVV8 208 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 REM2Q8IYK8 340 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 GPR65Q8IYL9 337 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 SVOPQ8N4V2 548 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 POC5Q8NA72 575 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 IL17RDQ8NFM7 739 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 OR52I1Q8NGK6 324 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 RNF31Q96EP0 1072 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF354BQ96LW1 612 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TIMP4Q99727 224 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 IER2Q9BTL4 223 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 OSGEPL1Q9H4B0 414 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 EQTNQ9NQ60 294 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 IMP3Q9NV31 184 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 RABL2AQ9UBK7 228 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 TESQ9UGI8 421 aaKnown RBP5.69□□□□□ -1.5
CLCN3-201ENST00000347613 FBXW2Q9UKT8 454 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 PCDHGB6Q9Y5F9 930 aa5.69□□□□□ -1.5
CLCN3-201ENST00000347613 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PRR19A6NJB7 356 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 A6NJY4 79 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 H3BN98 237 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 NDUFS4O43181 175 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SLC28A2O43868 658 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PRNPP04156 253 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OSMP13725 252 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 VAMP1P23763 118 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 AK4P27144 223 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 STXBP1P61764 594 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SLAMF1Q13291 335 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ILKQ13418 452 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CLEC12AQ5QGZ9 265 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 C6orf132Q5T0Z8 1188 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ATAD3BQ5T9A4 648 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 NR2C2APQ86WQ0 139 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 C17orf64Q86WR6 236 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SLC34A3Q8N130 599 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OR9A2Q8NGT5 310 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 HCAR2Q8TDS4 363 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 GATAD2BQ8WXI9 593 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 KLHL6Q8WZ60 621 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 FGF14Q92915 247 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 MYDGFQ969H8 173 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 TP53INP1Q96A56 240 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 RAD51AP1Q96B01 352 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 MS4A6EQ96DS6 147 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 GIMAP5Q96F15 307 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ABHD8Q96I13 439 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 LRIG1Q96JA1 1093 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 C12orf66Q96MD2 445 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 OR2A14Q96R47 310 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 FERD3LQ96RJ6 166 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 NLNQ9BYT8 704 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 UCK2Q9BZX2 261 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PPIL3Q9H2H8 161 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CCDC86Q9H6F5 360 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 DDX31Q9H8H2 851 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 CCNB1IP1Q9NPC3 277 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 SNTG1Q9NSN8 517 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ATAD3AQ9NVI7 634 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 ANKMY1Q9P2S6 941 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 DEC1Q9P2X7 70 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 PLEKHB1Q9UF11 243 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 NDOR1Q9UHB4 597 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 MRPS2Q9Y399 296 aaKnown RBP5.68□□□□□ -1.5
CLCN3-201ENST00000347613 BOLA1Q9Y3E2 137 aa5.68□□□□□ -1.5
CLCN3-201ENST00000347613 EDDM13A0A1B0GTR0 161 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms