RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 TPOP07202 933 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 CSNK2A2P19784 350 aaPredicted RBP13.27□□□□□ -0.29
HMGN3-202ENST00000344726 GPX3P22352 226 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 MAGEA5P43359 124 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 FBXW4P57775 412 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 NAA20P61599 178 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 MRPS35P82673 323 aaKnown RBP13.27□□□□□ -0.29
HMGN3-202ENST00000344726 MAP4K2Q12851 820 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 NTRK2Q16620 822 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 PRSS53Q2L4Q9 553 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 TRMT12Q53H54 448 aaKnown RBP13.27□□□□□ -0.29
HMGN3-202ENST00000344726 CFAP157Q5JU67 520 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 LIPMQ5VYY2 423 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 SLC22A10Q63ZE4 541 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 CLEC6AQ6EIG7 209 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 XKRXQ6PP77 449 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 FBXW8Q8N3Y1 598 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 RIBC1Q8N443 379 aaPredicted RBP13.27□□□□□ -0.29
HMGN3-202ENST00000344726 OR7G1Q8NGA0 311 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 OR5M3Q8NGP4 307 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 PHF10Q8WUB8 498 aaKnown RBP13.27□□□□□ -0.29
HMGN3-202ENST00000344726 TP53INP1Q96A56 240 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 APOPT1Q96IL0 206 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 FAIM2Q9BWQ8 316 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 GATA5Q9BWX5 397 aaPredicted RBP13.27□□□□□ -0.29
HMGN3-202ENST00000344726 IL1RL2Q9HB29 575 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 MKS1Q9NXB0 559 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 SLC17A7Q9P2U7 560 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 LGALS13Q9UHV8 139 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 CNOT11Q9UKZ1 510 aaKnown RBP13.27□□□□□ -0.29
HMGN3-202ENST00000344726 CCL27Q9Y4X3 112 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 PTGDR2Q9Y5Y4 395 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 TACC2O95359 2948 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 CCDC151A5D8V7 595 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 LRRC3CA6NJW4 275 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 E9PLN8 166 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 ACOT7O00154 380 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 PRRG2O14669 202 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 IGHG3P01860 377 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 SNRPB2P08579 225 aaKnown RBP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 RFPL3SP0C7P2 107 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 DRD2P14416 443 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 CREB1P16220 341 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 PCSK2P16519 638 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 AGAP20933 346 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 NNATQ16517 81 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 HYAL4Q2M3T9 481 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 ERCC6LQ2NKX8 1250 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 BICRALQ6AI39 1079 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 ARHGAP11AQ6P4F7 1023 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 EMBQ6PCB8 327 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 RGS9BPQ6ZS82 235 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 TRIM46Q7Z4K8 759 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 SLC22A16Q86VW1 577 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 MCEMP1Q8IX19 187 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 SRRM1Q8IYB3 904 aaKnown RBP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 CCDC116Q8IYX3 515 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 DND1Q8IYX4 353 aaKnown RBP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 PRR22Q8IZ63 422 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 TAGAPQ8N103 731 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 INTS1Q8N201 2190 aaKnown RBP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 LRRC25Q8N386 305 aaPredicted RBP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 CAVIN3Q969G5 261 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 EXOSC8Q96B26 276 aaKnown RBP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 VKORC1Q9BQB6 163 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 ITPAQ9BY32 194 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 NXF5Q9H1B4 397 aaKnown RBP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 ANKRA2Q9H9E1 313 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 TNFRSF10DQ9UBN6 386 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 PSME2Q9UL46 239 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 NPFFR2Q9Y5X5 522 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF780BQ9Y6R6 833 aa13.26□□□□□ -0.29
HMGN3-202ENST00000344726 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.26□□□□□ -0.29
HMGN3-202ENST00000344726 NUP214P35658 2090 aaPredicted RBP13.25□□□□□ -0.29
HMGN3-202ENST00000344726 HCFC1P51610 2035 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 PCNX3Q9H6A9 2034 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 PDZD2O15018 2839 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 SPAG7O75391 227 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 NME6O75414 186 aaPredicted RBP13.25□□□□□ -0.29
HMGN3-202ENST00000344726 CLDN14O95500 239 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 ANXA4P09525 319 aaPredicted RBP13.25□□□□□ -0.29
HMGN3-202ENST00000344726 UROSP10746 265 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 ALDH3A1P30838 453 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 KIR3DL1P43629 444 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 SMSP52788 366 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 CEBPEQ15744 281 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF628Q5EBL2 1059 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 SPDYAQ5MJ70 313 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 C6orf163Q5TEZ5 329 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 HLA-DQA1Q5Y7H0 255 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 DESI1Q6ICB0 168 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 TRILQ7L0X0 811 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 FAM109AQ8N4B1 249 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 C17orf47Q8NEP4 570 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 OR52R1Q8NGF1 315 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF675Q8TD23 568 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 FAM111AQ96PZ2 611 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 MECRQ9BV79 373 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 CNIH4Q9P003 139 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms