RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SNX10Q9Y5X0 201 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 B3GALT1Q9Y5Z6 326 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MDFIC2A0A1B0GVS7 189 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TMIGD3P0DMS9 266 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR5H8P0DN80 308 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 KIR3DL2P43630 455 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 PLA2G16P53816 162 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 DYNLT1P63172 113 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SSBP1Q04837 148 aaKnown RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TSPAN31Q12999 210 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 MEF2DQ14814 521 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 HLFQ16534 295 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM241Q24JQ0 296 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ERASQ7Z444 233 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 OR6V1Q8N148 313 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF516Q92618 1163 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF669Q96BR6 464 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-202ENST00000344113 SLC38A3Q99624 504 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 CNPPD1Q9BV87 410 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 TINAGQ9UJW2 476 aa3.61□□□□□ -1.83
SYNE2-202ENST00000344113 hCG_1807616A0A1W2PRN6 198 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TYMPP19971 482 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 HCCSP53701 268 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TBPL2Q6SJ96 375 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NDC1Q9BTX1 674 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SRRQ9GZT4 340 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 POU2F3Q9UKI9 436 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PCDHA8Q9Y5H6 950 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FAM205AQ6ZU69 1335 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 D6RAR5 112 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 UPK1AO00322 258 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TOR1BO14657 336 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CYB5AP00167 134 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GPC1P35052 558 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 WASP42768 502 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CARD17Q5XLA6 110 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FAM71AQ8IYT1 594 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PCDHA10Q9Y5I2 948 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ALPK2Q86TB3 2170 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 HEG1Q9ULI3 1381 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TEX13CA0A0J9YWL9 993 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TPST2O60704 377 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TBX18O95935 607 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NR2C1P13056 603 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FIBCD1Q8N539 461 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 OR5K1Q8NHB7 308 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LPGAT1Q92604 370 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MEAF6Q9HAF1 191 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MRPL42Q9Y6G3 142 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 J3KRW8 73 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SLC16A4O15374 487 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 THP07101 528 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CPOXP36551 454 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TAS2R30P59541 319 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 INSM1Q01101 510 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CLEC12AQ5QGZ9 265 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 UBE3DQ7Z6J8 389 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 Q8N9G6 341 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PIGXQ8TBF5 258 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NELL1Q92832 810 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FAIM2Q9BWQ8 316 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LRRC3Q9BY71 257 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM200CA6NKL6 621 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LEUTXA8MZ59 168 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SLC35E2BP0CK96 405 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SLC35E2P0CK97 266 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GGT6Q6P531 493 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ENPP7Q6UWV6 458 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TRAPPC5Q8IUR0 188 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TFGQ92734 400 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 HSFY1Q96LI6 401 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 APOLD1Q96LR9 279 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SNTG1Q9NSN8 517 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TXNL4BQ9NX01 149 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PITPNC1Q9UKF7 332 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 COQ4Q9Y3A0 265 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NUDT3O95989 172 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 F2RL1P55085 397 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TATDN3Q17R31 274 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 C6orf132Q5T0Z8 1188 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM205Q6UW68 189 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LINGO2Q7L985 606 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ANKLE1Q8NAG6 615 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 OR2T12Q8NG77 320 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 BABAM2Q9NXR7 383 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF214Q9UL59 606 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 FBXO24O75426 580 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PFKLP17858 780 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NAA10P41227 235 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 RABIFP47224 123 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MFSD10Q14728 455 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CMIPQ8IY22 773 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 OR5A2Q8NGI9 324 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 STAG3L4Q8TBR4 150 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 PSMF1Q92530 271 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 EDEM1Q92611 657 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CMSS1Q9BQ75 279 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SLC12A9Q9BXP2 914 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 AGPAT4Q9NRZ5 378 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SAE1Q9UBE0 346 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms