RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 OR12D1P0DN82 309 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 ZNF3P17036 446 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 CCR7P32248 378 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 NRIP1P48552 1158 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 GDI2P50395 445 aaKnown RBP10.37□□□□□ -0.75
RPL28-201ENST00000344063 CEBPGP53567 150 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 ERVK-21P61565 698 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 GPR68Q15743 365 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 BOLLQ8N9W6 283 aaKnown RBP10.37□□□□□ -0.75
RPL28-201ENST00000344063 UBTD2Q8WUN7 234 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 DNAJA4Q8WW22 397 aaPredicted RBP10.37□□□□□ -0.75
RPL28-201ENST00000344063 VMP1Q96GC9 406 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 MNTQ99583 582 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 HOXD1Q9GZZ0 328 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 TMEM30AQ9NV96 361 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 MGAT4CQ9UBM8 478 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 ACSL5Q9ULC5 683 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 PLAGL1Q9UM63 463 aa10.37□□□□□ -0.75
RPL28-201ENST00000344063 ARHGAP33O14559 1287 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SLC31A1O15431 190 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 HPGDSO60760 199 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 APEX1P27695 318 aaKnown RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 RNF144AP50876 292 aaPredicted RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 UGT3A2Q3SY77 523 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 LEXMQ3ZCV2 418 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SLC8B1Q6J4K2 584 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SIMC1Q8NDZ2 872 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 KLHDC9Q8NEP7 349 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 OR5J2Q8NH18 312 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ISG20Q96AZ6 181 aaKnown RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 MCHR1Q99705 422 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 C17orf62Q9BQA9 187 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 C11orf54Q9H0W9 315 aaPredicted RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 AKIP1Q9NQ31 210 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 TAS2R3Q9NYW6 316 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 LIPT1Q9Y234 373 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 WDR45Q9Y484 360 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ALG5Q9Y673 324 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ANKRD28O15084 1053 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SLC16A6O15403 523 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 CDC40O60508 579 aaKnown RBP eCLIP10.36□□□□□ -0.75
RPL28-201ENST00000344063 RFPL3O75679 317 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 MMP2P08253 660 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ACVR1BP36896 505 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 TAS2R43P59537 309 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SCRN3Q0VDG4 424 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SLAMF1Q13291 335 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SNTB2Q13425 540 aaKnown RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 GALEQ14376 348 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 PTPRRQ15256 657 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SYT6Q5T7P8 510 aaPredicted RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 PLAG1Q6DJT9 500 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 LRRN1Q6UXK5 716 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 TCEAL8Q8IYN2 117 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 SPAG16Q8N0X2 631 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 PJA1Q8NG27 643 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ZNF563Q8TA94 476 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ASB11Q8WXH4 323 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 TMEM19Q96HH6 336 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 AHCYL2Q96HN2 611 aaKnown RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 ZNF385DQ9H6B1 395 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 MKKSQ9NPJ1 570 aaPredicted RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 SLC39A1Q9NY26 324 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 NUP214P35658 2090 aaPredicted RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 GLOD5A6NK44 160 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 OR2AT4A6NND4 320 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 RASGRP1O95267 797 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 H2AFB2P0C5Z0 115 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 TACR1P25103 407 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ACVR2AP27037 513 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 AOAHP28039 575 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ODF4Q2M2E3 257 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 AFMIDQ63HM1 303 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 RAB12Q6IQ22 244 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 ARHGAP39Q9C0H5 1083 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 NMNAT1Q9HAN9 279 aaPredicted RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 FOLH1BQ9HBA9 442 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 CUEDC1Q9NWM3 386 aaPredicted RBP10.36□□□□□ -0.75
RPL28-201ENST00000344063 TMEM5Q9Y2B1 443 aa10.36□□□□□ -0.75
RPL28-201ENST00000344063 J3KTA2 159 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 PCDHGA12O60330 932 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 RPP14O95059 124 aaKnown RBP10.35□□□□□ -0.75
RPL28-201ENST00000344063 HAGHLQ6PII5 290 aaPredicted RBP10.35□□□□□ -0.75
RPL28-201ENST00000344063 ZNF782Q6ZMW2 699 aaPredicted RBP10.35□□□□□ -0.75
RPL28-201ENST00000344063 LINC00299Q6ZSB3 139 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 PLCZ1Q86YW0 608 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 GID4Q8IVV7 300 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 SUN3Q8TAQ9 357 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 SETD6Q8TBK2 473 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 DYNC2LI1Q8TCX1 351 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 KLK6Q92876 244 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 ELMOD3Q96FG2 381 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 MED30Q96HR3 178 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 MBOAT4Q96T53 435 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 CSF3RQ99062 836 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 P2RY13Q9BPV8 354 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 C1QTNF3Q9BXJ4 246 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 OR10A4Q9H209 315 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 NTN4Q9HB63 628 aa10.35□□□□□ -0.75
RPL28-201ENST00000344063 GALNT9Q9HCQ5 603 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms