RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CLDN6P56747 220 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 ACY1Q03154 408 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 TRA2AQ13595 282 aaKnown RBP eCLIP13.79□□□□□ -0.2
CXCL12-201ENST00000343575 FXNQ16595 210 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 CALHM3Q86XJ0 350 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 CCDC116Q8IYX3 515 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 GPR135Q8IZ08 494 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 CENPSQ8N2Z9 138 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 NATD1Q8N6N6 113 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 OR10A6Q8NH74 314 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 CANT1Q8WVQ1 401 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 ANKRD9Q96BM1 317 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-201ENST00000343575 ZBED6CLQ96FA7 236 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-201ENST00000343575 PEX11GQ96HA9 241 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 PHOX2BQ99453 314 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 DCUN1D5Q9BTE7 237 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 THUMPD3Q9BV44 507 aaKnown RBP13.79□□□□□ -0.2
CXCL12-201ENST00000343575 ALG2Q9H553 416 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 ACSL6Q9UKU0 697 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 CDC14AQ9UNH5 594 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 WDFY3Q8IZQ1 3526 aa13.79□□□□□ -0.2
CXCL12-201ENST00000343575 OR2W5A6NFC9 320 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 PLOD2O00469 737 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 SULT1C4O75897 302 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 CCNA2P20248 432 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 OR4D2P58180 307 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 ID2Q02363 134 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 HSPB3Q12988 150 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 ERV3-1Q14264 604 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 RAB39AQ14964 217 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 PWWP2BQ6NUJ5 590 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 OR5AK3PQ8NH89 298 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 RAB2BQ8WUD1 216 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 SLC35B4Q969S0 331 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 RBCK1Q9BYM8 510 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 GPN2Q9H9Y4 310 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-201ENST00000343575 POLR1BQ9H9Y6 1135 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 SELENONQ9NZV5 590 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 VPS4AQ9UN37 437 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 DLGAP1O14490 977 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 JRKO75564 520 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 DNAJB5O75953 348 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 CCL4P13236 92 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 RNH1P13489 461 aaKnown RBP13.78□□□□□ -0.2
CXCL12-201ENST00000343575 ALAS2P22557 587 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 TLX1P31314 330 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-201ENST00000343575 XKP51811 444 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 NCBP2P52298 156 aaKnown RBP eCLIP13.78□□□□□ -0.2
CXCL12-201ENST00000343575 INSM1Q01101 510 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-201ENST00000343575 PMS2P3Q13401 168 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 C1QTNF12Q5T7M4 302 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 STPG1Q5TH74 334 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 CYP2R1Q6VVX0 501 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 IFNEQ86WN2 208 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 OR4K14Q8NGD5 310 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 OR51Q1Q8NH59 317 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 MVB12AQ96EY5 273 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 SLC35A5Q9BS91 424 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 NDC1Q9BTX1 674 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 CHST8Q9H2A9 424 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 SLC22A11Q9NSA0 550 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 SMPD3Q9NY59 655 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-201ENST00000343575 ZNF282Q9UDV7 671 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-201ENST00000343575 ERGIC3Q9Y282 383 aa13.78□□□□□ -0.2
CXCL12-201ENST00000343575 HEMK1Q9Y5R4 338 aaPredicted RBP13.78□□□□□ -0.2
CXCL12-201ENST00000343575 SAC3D1A6NKF1 404 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 DSCR3O14972 297 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 BCL10O95999 233 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 NTRK1P04629 796 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 CSNK2A2P19784 350 aaPredicted RBP13.77□□□□□ -0.21
CXCL12-201ENST00000343575 CCKBRP32239 447 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 SOX11P35716 441 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 AVPR1BP47901 424 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 EFNA3P52797 238 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 LTB4RQ15722 352 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 COX20Q5RI15 118 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 GPR107Q5VW38 600 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 RHBDD2Q6NTF9 364 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 ZNF773Q6PK81 442 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 PTRH1Q86Y79 214 aaKnown RBP13.77□□□□□ -0.21
CXCL12-201ENST00000343575 OR13F1Q8NGS4 319 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 TANKQ92844 425 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 PMEPA1Q969W9 287 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 BBS4Q96RK4 519 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 CDC6Q99741 560 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 IRF2BPLQ9H1B7 796 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 FANCEQ9HB96 536 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 LANCL2Q9NS86 450 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 EGFL7Q9UHF1 273 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 RARRES3Q9UL19 164 aa13.77□□□□□ -0.21
CXCL12-201ENST00000343575 ZFHX2Q9C0A1 2572 aaPredicted RBP13.77□□□□□ -0.21
CXCL12-201ENST00000343575 A0A1B0GX78 115 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 EFCAB7A8K855 629 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 PROB1E7EW31 1015 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 GPR75O95800 540 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 FGF5P12034 268 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 ATP6V1B2P21281 511 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 CSTF2P33240 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
CXCL12-201ENST00000343575 XCR1P46094 333 aa13.76□□□□□ -0.21
CXCL12-201ENST00000343575 ARSFP54793 590 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms