RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 DGKAP23743 735 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 S100A11P31949 105 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 KIAA1024LP59773 190 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 PITPNAQ00169 270 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 CPSF6Q16630 551 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMPD1-201ENST00000342245 MICBQ29980 383 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 CRB2Q5IJ48 1285 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 GCNT6Q5T4J0 391 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 HBMQ6B0K9 141 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 TMEM17Q86X19 198 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 PIANPQ8IYJ0 282 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 MAL2Q969L2 176 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 APOLD1Q96LR9 279 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 ZNF251Q9BRH9 671 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 PDCD10Q9BUL8 212 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 DUSP26Q9BV47 211 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 SORBS1Q9BX66 1292 aaKnown RBP17.56■□□□□ 0.4
SMPD1-201ENST00000342245 NMUR1Q9HB89 426 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 SLAMF7Q9NQ25 335 aa17.56■□□□□ 0.4
SMPD1-201ENST00000342245 MCRIP1C9JLW8 97 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 H3BN98 237 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 GPR182O15218 404 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 PEX14O75381 377 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 IFNW1P05000 195 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 ACP2P11117 423 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 MTNR1BP49286 362 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 CDKN1CP49918 316 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 GDI2P50395 445 aaKnown RBP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 PTPN5P54829 565 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 SHC2P98077 582 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 DEFA5Q01523 94 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 GK2Q14410 553 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 SWI5Q1ZZU3 235 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 METTL11BQ5VVY1 283 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 ALG1LQ6GMV1 187 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 PGAP1Q75T13 922 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 CLECL1Q8IZS7 167 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 NAGSQ8N159 534 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 FAM71CQ8NEG0 241 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 OR1S1Q8NH92 325 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 ZDHHC1Q8WTX9 485 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 GATAD2BQ8WXI9 593 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 TREX2Q9BQ50 279 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 R3HDMLQ9H3Y0 253 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 PRDM5Q9NQX1 630 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 MED11Q9P086 117 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 J3KTA2 159 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 GABRPO00591 440 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 RGS11O94810 467 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 SOX30O94993 753 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 NFATC1O95644 943 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 OPN1SWP03999 348 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 GDF5P43026 501 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 SELENOPP49908 381 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 ACSM1Q08AH1 577 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 SCARB2Q14108 478 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 PUM1Q14671 1186 aaKnown RBP eCLIP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 HLXQ14774 488 aaPredicted RBP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 XKR6Q5GH73 641 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 KIAA1211LQ6NV74 962 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 NCEH1Q6PIU2 408 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 UNC5DQ6UXZ4 953 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 SLC30A8Q8IWU4 369 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 OR52N1Q8NH53 320 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 APIPQ96GX9 242 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 FUBP3Q96I24 572 aaKnown RBP eCLIP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 TEFMQ96QE5 360 aaKnown RBP17.55■□□□□ 0.4
SMPD1-201ENST00000342245 SLC25A32Q9H2D1 315 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 TMEM38AQ9H6F2 299 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 RPS6KB2Q9UBS0 482 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 GPR160Q9UJ42 338 aa17.55■□□□□ 0.4
SMPD1-201ENST00000342245 MYBPHLA2RUH7 354 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 PRAMEF25A6NGN4 478 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 ANXA2P2A6NMY6 339 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 FAAHO00519 579 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 EFCAB14O75071 495 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 NCR1O76036 304 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 TFPIP10646 304 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 SMSP52788 366 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 DYRK1AQ13627 763 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 TRMT11Q7Z4G4 463 aaKnown RBP17.54■□□□□ 0.4
SMPD1-201ENST00000342245 PLEKHH3Q7Z736 793 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 GPR135Q8IZ08 494 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 C12orf66Q96MD2 445 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 MROH8Q9H579 483 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 TMEM30AQ9NV96 361 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 CLCA2Q9UQC9 943 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 MCM3APO60318 1980 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 HMSDA8MTL9 139 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 H7C0S8 307 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 ZNF593O00488 134 aaPredicted RBP17.54■□□□□ 0.4
SMPD1-201ENST00000342245 AQP8O94778 261 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 S100A8P05109 93 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 GLAP06280 429 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 SRPRAP08240 638 aaKnown RBP17.54■□□□□ 0.4
SMPD1-201ENST00000342245 SYPP08247 313 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 PLD1Q13393 1074 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 FGL2Q14314 439 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 Q3ZCU0 254 aa17.54■□□□□ 0.4
SMPD1-201ENST00000342245 SYT14P1Q58G82 188 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms