RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PEX1O43933 1283 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 LYPLA1O75608 230 aaPredicted RBP14.2□□□□□ -0.14
VAPA-201ENST00000340541 ZWINTO95229 277 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 CBX7O95931 251 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 CHEK2O96017 543 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 SERPINE1P05121 402 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 FBXO45P0C2W1 286 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 MYZAPP0CAP1 466 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 GPX3P22352 226 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 MEOX1P50221 254 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 KCNK10P57789 538 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 GPR85P60893 370 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 MRPS35P82673 323 aaKnown RBP14.2□□□□□ -0.14
VAPA-201ENST00000340541 RBPJQ06330 500 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 C2orf80Q0P641 193 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
VAPA-201ENST00000340541 CHI3L2Q15782 390 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 TRMT12Q53H54 448 aaKnown RBP14.2□□□□□ -0.14
VAPA-201ENST00000340541 RTL4Q6ZR62 310 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 IKBIPQ70UQ0 350 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 HOMEZQ8IX15 550 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 CCDC116Q8IYX3 515 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 SLC15A4Q8N697 577 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 ZFP62Q8NB50 900 aaPredicted RBP14.2□□□□□ -0.14
VAPA-201ENST00000340541 GOLM1Q8NBJ4 401 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 C16orf52Q8NHV5 167 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 ZNF675Q8TD23 568 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 TP53INP1Q96A56 240 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 TLCD1Q96CP7 247 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 C3orf30Q96M34 536 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 BRINP2Q9C0B6 783 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 C20orf27Q9GZN8 174 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 CHST11Q9NPF2 352 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 TIMMDC1Q9NPL8 285 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 SEC14L3Q9UDX4 400 aa14.2□□□□□ -0.14
VAPA-201ENST00000340541 MYO1GB0I1T2 1018 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 PRSS44E7EML9 344 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 UNC5CO95185 931 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 CCL3P10147 92 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 PCSK2P16519 638 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 SDC1P18827 310 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 ELAVL4P26378 380 aaKnown RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 WDR4P57081 412 aaKnown RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 RPL38P63173 70 aaKnown RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 ALDH6A1Q02252 535 aaKnown RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 CASP8Q14790 479 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 MYO7BQ6PIF6 2116 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 RPTNQ6XPR3 784 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 DDIASQ8IXT1 998 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 SAMD14Q8IZD0 417 aaPredicted RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 ZNF808Q8N4W9 903 aaPredicted RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 FAM98AQ8NCA5 519 aaKnown RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 C17orf47Q8NEP4 570 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 OR9A2Q8NGT5 310 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 CDC26Q8NHZ8 85 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 SLC22A8Q8TCC7 542 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 SPACA9Q96E40 222 aaPredicted RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 SGCZQ96LD1 299 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 GPR137Q96N19 417 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 SORT1Q99523 831 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 CCT7Q99832 543 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 TSPAN10Q9H1Z9 355 aaPredicted RBP14.19□□□□□ -0.14
VAPA-201ENST00000340541 ANKRA2Q9H9E1 313 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 TMBIM4Q9HC24 238 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 KCNK9Q9NPC2 374 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 GIMAP2Q9UG22 337 aa14.19□□□□□ -0.14
VAPA-201ENST00000340541 APCP25054 2843 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 TMEM114B3SHH9 223 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 KLRC4-KLRK1H3BQV0 150 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 JUNP05412 331 aaKnown RBP14.18□□□□□ -0.14
VAPA-201ENST00000340541 ZNF24P17028 368 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 AGAP20933 346 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 RFC3P40938 356 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 CA7P43166 264 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 EMDP50402 254 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 NR0B1P51843 470 aaKnown RBP14.18□□□□□ -0.14
VAPA-201ENST00000340541 CASP6P55212 293 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 ABCE1P61221 599 aaKnown RBP14.18□□□□□ -0.14
VAPA-201ENST00000340541 KRTCAP3Q53RY4 240 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 C6orf163Q5TEZ5 329 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 XKRXQ6PP77 449 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 TMEM64Q6YI46 380 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 CHERPQ8IWX8 916 aaKnown RBP14.18□□□□□ -0.14
VAPA-201ENST00000340541 POGLUT1Q8NBL1 392 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 OR2M7Q8NG81 312 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 OR52R1Q8NGF1 315 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 ITLN2Q8WWU7 325 aaPredicted RBP14.18□□□□□ -0.14
VAPA-201ENST00000340541 ITPAQ9BY32 194 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 RYDENQ9NUL5 291 aaKnown RBP14.18□□□□□ -0.14
VAPA-201ENST00000340541 TMED5Q9Y3A6 229 aa14.18□□□□□ -0.14
VAPA-201ENST00000340541 TRGV8A0A0C4DH27 118 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 ATP6AP2A0A1C7CYW4 349 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 TMEM120BA0PK00 339 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 NPIPA5E9PKD4 350 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 G3V3Y1 287 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 CCL21O00585 134 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 SKAP2O75563 359 aaPredicted RBP14.17□□□□□ -0.14
VAPA-201ENST00000340541 ATP6AP2O75787 350 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 HSPA4LO95757 839 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 BGNP21810 368 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms