RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 RHOXF2Q9BQY4 288 aa12.25□□□□□ -0.45
NUDCD3-201ENST00000338427 TSPYL1Q9H0U9 437 aa12.25□□□□□ -0.45
NUDCD3-201ENST00000338427 EPB41L4BQ9H329 900 aa12.25□□□□□ -0.45
NUDCD3-201ENST00000338427 MAT2BQ9NZL9 334 aa12.25□□□□□ -0.45
NUDCD3-201ENST00000338427 EHD3Q9NZN3 535 aa12.25□□□□□ -0.45
NUDCD3-201ENST00000338427 TBK1Q9UHD2 729 aa12.25□□□□□ -0.45
NUDCD3-201ENST00000338427 ADAM29Q9UKF5 820 aa12.25□□□□□ -0.45
NUDCD3-201ENST00000338427 BOKQ9UMX3 212 aaPredicted RBP12.25□□□□□ -0.45
NUDCD3-201ENST00000338427 RIPK2O43353 540 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 CBX7O95931 251 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 OTCP00480 354 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 PYGBP11216 843 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 PCSK2P16519 638 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 CNTFP26441 200 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 GDF1P27539 372 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 MSX1P28360 303 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 ZFP36L2P47974 494 aaKnown RBP12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 MRPS35P82673 323 aaKnown RBP12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 HMGCS1Q01581 520 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 MAP4K2Q12851 820 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 SLC29A2Q14542 456 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 GGTA1PQ4G0N0 100 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 WIPI1Q5MNZ9 446 aaPredicted RBP12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 TAOK1Q7L7X3 1001 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 PAGE2Q7Z2X7 111 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 ULK2Q8IYT8 1036 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 MYRIPQ8NFW9 859 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 NEIL3Q8TAT5 605 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 METTL6Q8TCB7 284 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 KAT2AQ92830 837 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 C14orf79Q96F83 325 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 CNRIP1Q96F85 164 aaPredicted RBP12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 APIPQ96GX9 242 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 RILPQ96NA2 401 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 TIMP4Q99727 224 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 C1QTNF3Q9BXJ4 246 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 ITPAQ9BY32 194 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 ANGPTL4Q9BY76 406 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 C12orf65Q9H3J6 166 aaKnown RBP12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 MCCC2Q9HCC0 563 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 ACKR4Q9NPB9 350 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 TRPS1Q9UHF7 1281 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 ZNF639Q9UID6 485 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 SNX6Q9UNH7 406 aa12.24□□□□□ -0.45
NUDCD3-201ENST00000338427 KIAA1549Q9HCM3 1950 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 C15orf38-AP3S2A0A0A6YYH1 394 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 C1orf226A1L170 272 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 FIGNL2A6NMB9 653 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 TP53I11O14683 189 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 ESRRBO95718 433 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 HOXD4P09016 255 aaPredicted RBP12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 IMPDH1P20839 514 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 ABCD3P28288 659 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 PTGDSP41222 190 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 AGFG1P52594 562 aaKnown RBP12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 TOMM20Q15388 145 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 DCST1Q5T197 706 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 PLXDC2Q6UX71 529 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 YRDCQ86U90 279 aaKnown RBP12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 LIX1Q8N485 282 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 NAXEQ8NCW5 288 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 TNIP2Q8NFZ5 429 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 OR52R1Q8NGF1 315 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 HGDQ93099 445 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 KLHL29Q96CT2 875 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 NTNG2Q96CW9 530 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 TXLNGYQ9BZA5 131 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 VPS29Q9UBQ0 182 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 EMCNQ9ULC0 261 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 DLGAP4Q9Y2H0 992 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 PLLPQ9Y342 182 aa12.23□□□□□ -0.45
NUDCD3-201ENST00000338427 ANKRD33BA6NCL7 494 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 C17orf51A8MQB3 221 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 UBFD1O14562 309 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 WDR1O75083 606 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 ICOSLGO75144 302 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 IL3P08700 152 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 CSNK2A2P19784 350 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 TAC1P20366 129 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 ATP5F1P24539 256 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 EMDP50402 254 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 PRKAA2P54646 552 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 FOXA1P55317 472 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 CRYZQ08257 329 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 RPS6KA2Q15349 733 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 LGSNQ5TDP6 509 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 GPRIN3Q6ZVF9 776 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 WDR53Q7Z5U6 358 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 VWA5B2Q8N398 1253 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 OR7G1Q8NGA0 311 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 RDH11Q8TC12 318 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 C16orf78Q8WTQ4 265 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 MZB1Q8WU39 189 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 EXOSC8Q96B26 276 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 CTHRC1Q96CG8 243 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 OMA1Q96E52 524 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 EBPLQ9BY08 206 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 ACPTQ9BZG2 426 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 UBQLN3Q9H347 655 aa12.22□□□□□ -0.45
NUDCD3-201ENST00000338427 BRF2Q9HAW0 419 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms