RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 OR7D2Q96RA2 312 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 CDC6Q99741 560 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 CLDN16Q9Y5I7 305 aa13.74□□□□□ -0.21
CBX3-201ENST00000337620 A0A087WV62 115 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 FAM149AA5PLN7 773 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 M0QX08 132 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 SLITRK5O94991 958 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 OPN1SWP03999 348 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 NR2F1P10589 423 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 FGF5P12034 268 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 FASP25445 335 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 GCKP35557 465 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 SERTAD2Q14140 314 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 MYBPC3Q14896 1274 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 FHL5Q5TD97 284 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 MFSD12Q6NUT3 480 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 FKBP9P1Q75LS8 142 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 CBLL1Q75N03 491 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 BPHLQ86WA6 291 aaPredicted RBP13.73□□□□□ -0.21
CBX3-201ENST00000337620 VWA5B2Q8N398 1253 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 TMEM102Q8N9M5 508 aaPredicted RBP13.73□□□□□ -0.21
CBX3-201ENST00000337620 MIPOL1Q8TD10 442 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 ADAMTS15Q8TE58 950 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 SLC9A6Q92581 669 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 CXorf21Q9HAI6 301 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 MKKSQ9NPJ1 570 aaPredicted RBP13.73□□□□□ -0.21
CBX3-201ENST00000337620 ADPRHL2Q9NX46 363 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 MMACHCQ9Y4U1 282 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 KCNE3Q9Y6H6 103 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 PRAMEF27A3QJZ7 478 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 SUV39H1O43463 412 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 LRP3O75074 770 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 RFPL3O75679 317 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 HBQ1P09105 142 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 TNNI3P19429 210 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 PEX2P28328 305 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 MAGEA8P43361 318 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 STT3AP46977 705 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 CRYBA2P53672 197 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 MAP4K2Q12851 820 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 NKAIN1Q4KMZ8 207 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 CYBRD1Q53TN4 286 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 HMBOX1Q6NT76 420 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 EIF3MQ7L2H7 374 aaKnown RBP13.73□□□□□ -0.21
CBX3-201ENST00000337620 ERMP1Q7Z2K6 904 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 VTCN1Q7Z7D3 282 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 BMPERQ8N8U9 685 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 POP5Q969H6 163 aaKnown RBP13.73□□□□□ -0.21
CBX3-201ENST00000337620 CTHRC1Q96CG8 243 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 SLC22A11Q9NSA0 550 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 AKAP7Q9P0M2 348 aaPredicted RBP13.73□□□□□ -0.21
CBX3-201ENST00000337620 CTSFQ9UBX1 484 aa13.73□□□□□ -0.21
CBX3-201ENST00000337620 OTOGLQ3ZCN5 2332 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 PGM3O95394 542 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 FCGR1AP12314 374 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 MAN2A2P49641 1150 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CLCN2P51788 898 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 PGDP52209 483 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CLDN6P56747 220 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 DCDP81605 110 aaKnown RBP13.72□□□□□ -0.21
CBX3-201ENST00000337620 E2F1Q01094 437 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 MC2RQ01718 297 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 ZNF267Q14586 743 aaPredicted RBP13.72□□□□□ -0.21
CBX3-201ENST00000337620 MAPK11Q15759 364 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CCDC80Q76M96 950 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 LGI4Q8N135 537 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 ANKFN1Q8N957 763 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 OR52R1Q8NGF1 315 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 TSLPQ969D9 159 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 HSH2DQ96JZ2 352 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CMKLR1Q99788 373 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 YY1AP1Q9H869 796 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 PNO1Q9NRX1 252 aaKnown RBP13.72□□□□□ -0.21
CBX3-201ENST00000337620 MKL2Q9ULH7 1088 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 HRKO00198 91 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CASQ2O14958 399 aaPredicted RBP13.72□□□□□ -0.21
CBX3-201ENST00000337620 TGM1P22735 817 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CCKBRP32239 447 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 PCBP3P57721 371 aaKnown RBP13.72□□□□□ -0.21
CBX3-201ENST00000337620 INSM1Q01101 510 aaPredicted RBP13.72□□□□□ -0.21
CBX3-201ENST00000337620 BIKQ13323 160 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 ILKQ13418 452 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 GRAMD1BQ3KR37 738 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 GPAT3Q53EU6 434 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CRB2Q5IJ48 1285 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 ATAD3BQ5T9A4 648 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CDC73Q6P1J9 531 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 QSOX2Q6ZRP7 698 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 SHISA6Q6ZSJ9 500 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 MED25Q71SY5 747 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 COX15Q7KZN9 410 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 OLIG3Q7RTU3 272 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 PATL1Q86TB9 770 aaKnown RBP13.72□□□□□ -0.21
CBX3-201ENST00000337620 LAPTM4BQ86VI4 370 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 ICA1LQ8NDH6 482 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 TAMM41Q96BW9 452 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 SLC35A4Q96G79 324 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 CNPPD1Q9BV87 410 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 MAGIXQ9H6Y5 334 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms