RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 RADILQ96JH8 1075 aa13.61□□□□□ -0.23
SYNGR1-203ENST00000328933 TRNT1Q96Q11 434 aaKnown RBP13.61□□□□□ -0.23
SYNGR1-203ENST00000328933 TRPV5Q9NQA5 729 aa13.61□□□□□ -0.23
SYNGR1-203ENST00000328933 IGHV3-20A0A0C4DH32 117 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 A0A1W2PRG6 482 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 ANXA8P13928 327 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 NPPBP16860 134 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 XRCC1P18887 633 aaPredicted RBP13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 ACADVLP49748 655 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 KCNC4Q03721 635 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 PUM1Q14671 1186 aaKnown RBP eCLIP13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 CANT1Q8WVQ1 401 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 UBXN10Q96LJ8 280 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 SPRTNQ9H040 489 aaPredicted RBP13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 C14orf105Q9NVL8 296 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 PRAMEF33A0A0G2JMD5 474 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 WASHC1A8K0Z3 465 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 CPMP14384 443 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 RAB38P57729 211 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 PTGES3Q15185 160 aaKnown RBP13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 DEFB109BQ30KR1 87 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 UGT3A2Q3SY77 523 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 ABRAXAS1Q6UWZ7 409 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 WASH2PQ6VEQ5 465 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 NLRP8Q86W28 1048 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 ZADH2Q8N4Q0 377 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 BMFQ96LC9 184 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 SLC6A16Q9GZN6 736 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 MEAF6Q9HAF1 191 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 WDR37Q9Y2I8 494 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 ANHXE9PGG2 379 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 CD1CP29017 333 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 VMACQ2NL98 169 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 CACTIN-AS1Q8N1I8 211 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 LRTOMTQ8WZ04 291 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 MSLNLQ96KJ4 702 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 WDR77Q9BQA1 342 aaPredicted RBP13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 HOXD1Q9GZZ0 328 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 MKRN2OSH3BPM6 223 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 AIFM1O95831 613 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 OPN1LWP04000 364 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 HMGN1P05114 100 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 BCL6P41182 706 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 TRAM2Q15035 370 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 AAGABQ6PD74 315 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 SIRT6Q8N6T7 355 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 RFKQ969G6 155 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 TMEM19Q96HH6 336 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 UCKL1Q9NWZ5 548 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 DNAJB9Q9UBS3 223 aa13.6□□□□□ -0.23
SYNGR1-203ENST00000328933 DCDC2BA2VCK2 349 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 BCKDKO14874 412 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 ALOX12BO75342 701 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 THRBP10828 461 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 RBBP4Q09028 425 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 GALNT1Q10472 559 aaPredicted RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 KIAA1614Q5VZ46 1190 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 CARD17Q5XLA6 110 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 TMEM64Q6YI46 380 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 PIGWQ7Z7B1 504 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 KCNE4Q8WWG9 221 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 BOKQ9UMX3 212 aaPredicted RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 MRPS7Q9Y2R9 242 aaKnown RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 CACNA1IQ9P0X4 2223 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 IDSB3KWA1 339 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 TNFSF14O43557 240 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 NOBOXO60393 691 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 FADS2O95864 444 aaKnown RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 SF3B4Q15427 424 aaKnown RBP eCLIP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 VWA2Q5GFL6 755 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 SLC35F1Q5T1Q4 408 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 HES3Q5TGS1 186 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 TMPRSS11AQ6ZMR5 421 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 ATG14Q6ZNE5 492 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 MEIOBQ8N635 442 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 TP53I13Q8NBR0 393 aaPredicted RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 TSPEARQ8WU66 669 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 TSEN15Q8WW01 171 aaKnown RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 CADM1Q9BY67 442 aaKnown RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 LIN28AQ9H9Z2 209 aaKnown RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 ZNF229Q9UJW7 825 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 NPIPA5A0A0B4J1W7 369 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 NPIPA7E9PJI5 369 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 DBIP07108 87 aaKnown RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 FGF4P08620 206 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 NPIPA8P0DM63 369 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 TIMM50Q3ZCQ8 353 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 CES4AQ5XG92 561 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 LPCAT4Q643R3 524 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 OR2T5Q6IEZ7 315 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 TMPPEQ6ZT21 453 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 YTHDF3Q7Z739 585 aaKnown RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 RPS19BP1Q86WX3 136 aaKnown RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 OR2T29Q8NH02 315 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 STT3BQ8TCJ2 826 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 NAA11Q9BSU3 229 aaPredicted RBP13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 AMBNQ9NP70 447 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 GRHPRQ9UBQ7 328 aa13.59□□□□□ -0.23
SYNGR1-203ENST00000328933 EFCAB9A8MZ26 197 aa13.58□□□□□ -0.23
SYNGR1-203ENST00000328933 NUDT21O43809 227 aaKnown RBP13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms