RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LRIT2A6NDA9 550 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 NEDD8-MDP1E9PL57 170 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 KPNA3O00505 521 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 LMO2P25791 158 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 CALCRP30988 508 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 MMP12P39900 470 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 SLC1A3P43003 542 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 EVX1P49640 407 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 CXCR3P49682 368 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 ZNF157P51786 506 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 RAB5BP61020 215 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 MLLT1Q03111 559 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 NTRK2Q16620 822 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 C3orf38Q5JPI3 329 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 FBXO47Q5MNV8 452 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 ANKS6Q68DC2 871 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 TGIF2LXQ8IUE1 241 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 OR6J1Q8NGC5 347 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 OR52P1PQ8NH57 321 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 HHIPQ96QV1 700 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 GABARAPL3Q9BY60 117 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 RIMS4Q9H426 269 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 SLC6A20Q9NP91 592 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 EXOSC3Q9NQT5 275 aaKnown RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 RNF19AQ9NV58 838 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 TAS2R3Q9NYW6 316 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 CRYL1Q9Y2S2 319 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 DOCK3Q8IZD9 2030 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 A0A1W2PPE3 182 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 LCMT2O60294 686 aaKnown RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 TPST2O60704 377 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 CSO75390 466 aaKnown RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 RP2O75695 350 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 CDC123O75794 336 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 GATBO75879 557 aaKnown RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 RECQL4O94761 1208 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 UBXN7O94888 489 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 PEX11BO96011 259 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 TFPIP10646 304 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 PNPLA4P41247 253 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 CHRNA4P43681 627 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 BDKRB1P46663 353 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 VLDLRP98155 873 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 OR4D1Q15615 310 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 AARDQ4LEZ3 155 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 ANGPTL8Q6UXH0 198 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 ZNF730Q6ZMV8 503 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 HFE2Q6ZVN8 426 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 BOLLQ8N9W6 283 aaKnown RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 KDF1Q8NAX2 398 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 B3GALNT2Q8NCR0 500 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 OR52K2Q8NGK3 314 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 FCRL1Q96LA6 429 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 YIPF4Q9BSR8 244 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 SAP130Q9H0E3 1048 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 ENKD1Q9H0I2 346 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 KCNK12Q9HB15 430 aa11.24□□□□□ -0.61
SHMT2-201ENST00000328923 AKAP7Q9P0M2 348 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-201ENST00000328923 MANSC4A6NHS7 340 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-201ENST00000328923 PIRO00625 290 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 FPGTO14772 594 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 LRRTM2O43300 516 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 OIP5O43482 229 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 STX11O75558 287 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 PBLDP30039 288 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-201ENST00000328923 DAOAP59103 153 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 KCNJ10P78508 379 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 POU4F2Q12837 409 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 ZSWIM7Q19AV6 140 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 SYTL3Q4VX76 610 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 SPIN4Q56A73 249 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 C6orf136Q5SQH8 315 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 ELP2Q6IA86 826 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 CDPF1Q6NVV7 123 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 UNQ6494/PRO21346Q6UXR6 183 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 TMIGD1Q6UXZ0 262 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 PIM3Q86V86 326 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 DCUN1D3Q8IWE4 304 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 ARHGAP12Q8IWW6 846 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 C11orf65Q8NCR3 313 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 TRPV1Q8NER1 839 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 RNASE11Q8TAA1 199 aaKnown RBP11.23□□□□□ -0.61
SHMT2-201ENST00000328923 THAP6Q8TBB0 222 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 METTL6Q8TCB7 284 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 SENP5Q96HI0 755 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-201ENST00000328923 GGACTQ9BVM4 153 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 ARHGAP39Q9C0H5 1083 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 TGIF2Q9GZN2 237 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 ZFP57Q9NU63 452 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 DDIT4Q9NX09 232 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 NDUFB11Q9NX14 153 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 SLC25A37Q9NYZ2 338 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 DUSP12Q9UNI6 340 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 YARS2Q9Y2Z4 477 aaKnown RBP11.23□□□□□ -0.61
SHMT2-201ENST00000328923 LSM2Q9Y333 95 aaKnown RBP11.23□□□□□ -0.61
SHMT2-201ENST00000328923 NPTNQ9Y639 398 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 A0A1W2PRQ8 180 aa11.23□□□□□ -0.61
SHMT2-201ENST00000328923 CXorf65A6NEN9 183 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms