RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 CXXC1Q9P0U4 656 aaPredicted RBP6.07□□□□□ -1.44
SSH1-202ENST00000326495 GTF3C1Q12789 2109 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 OR2T1O43869 369 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 MLLT3P42568 568 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 NCBP2-AS2Q69YL0 99 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 LINGO4Q6UY18 593 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 OR1J4Q8NGS1 313 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SMARCD2Q92925 531 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TMEM203Q969S6 136 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 PPA2Q9H2U2 334 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TEX13DA0A0J9YY54 714 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 SMIM28A0A1B0GU29 152 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 E7ESA3 106 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 RTCAO00442 366 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 UBBP0CG47 229 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 UBCP0CG48 685 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 CHRM1P11229 460 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 CKMT1AP12532 417 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 CERS1P27544 350 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 GDF10P55107 478 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 RPS27AP62979 156 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 UBA52P62987 128 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 NPRL3Q12980 569 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 MLC1Q15049 377 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 PSRC1Q6PGN9 363 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 SLC22A25Q6T423 547 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 B3GLCTQ6Y288 498 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 ATG10Q9H0Y0 220 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 UTS2RQ9UKP6 389 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TPPPO94811 219 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TMEM63AO94886 807 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SLC16A8O95907 504 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 ITGA5P08648 1049 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 AHCYP23526 432 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 POM121L1PQ3SYA9 428 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SPIN3Q5JUX0 258 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 MLIPQ5VWP3 458 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 ALG1LQ6GMV1 187 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TMEM220Q6QAJ8 160 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SLC9B2Q86UD5 537 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 DCP2Q8IU60 420 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 ASB17Q8WXJ9 295 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 OR5P2Q8WZ92 322 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TREX2Q9BQ50 279 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 ANKRD60Q9BZ19 345 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 GRHPRQ9UBQ7 328 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 C12orf71A8MTZ7 269 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SSX5O60225 188 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 UPK1BO75841 260 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 H2AFB2P0C5Z0 115 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 GALNT2Q10471 571 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SF3A2Q15428 464 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 EOGTQ5NDL2 527 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 OTUD1Q5VV17 481 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 NANOGP8Q6NSW7 305 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 GKN2Q86XP6 184 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 CMIPQ8IY22 773 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 PSMG2Q969U7 264 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 DPEP2Q9H4A9 486 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 NANOGQ9H9S0 305 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SEPSECSQ9HD40 501 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 PCDHGA8Q9Y5G5 932 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 PCCBP05166 539 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 HCKP08631 526 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 ATP1B2P14415 290 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 SLC26A5P58743 744 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 DAOAP59103 153 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 BEX3Q00994 111 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SSBP1Q04837 148 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 PHTF2Q8N3S3 785 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 OR5L1Q8NGL2 311 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 HPSE2Q8WWQ2 592 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SPTSSAQ969W0 71 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 KLHL9Q9P2J3 617 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 ERVK-19Q9WJR5 959 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 ADAM18Q9Y3Q7 739 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 ANKRD66B4E2M5 251 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 F6UZH7 168 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 J3QLW9 94 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TSPAN6O43657 245 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TPST2O60704 377 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SCGB1D2O95969 90 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TGFB1P01137 390 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 ZNF19P17023 458 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 CHRNB4P30926 498 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SNTB2Q13425 540 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 NFKBIDQ8NI38 313 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 GLYATL1Q969I3 302 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TMEM246Q9BRR3 403 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 NIPAL2Q9H841 368 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 SEC61A2Q9H9S3 476 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 PAQR5Q9NXK6 330 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 SLC27A5Q9Y2P5 690 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 MPC1LP0DKB6 136 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 CREB5Q02930 508 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 GK2Q14410 553 aaPredicted RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 PTPRCAPQ14761 206 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TARBP2Q15633 366 aaKnown RBP6.06□□□□□ -1.44
SSH1-202ENST00000326495 MSMO1Q15800 293 aa6.06□□□□□ -1.44
SSH1-202ENST00000326495 TCTE1Q5JU00 501 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms