RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CDH11P55287 796 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 LARS2Q15031 903 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF311Q5JNZ3 666 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 HSDL2Q6YN16 418 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 LRRTM4Q86VH4 590 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 PHC2Q8IXK0 858 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 PHF21AQ96BD5 680 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 MRGPRX3Q96LB0 322 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 CTRCQ99895 268 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 FAIM2Q9BWQ8 316 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 TEX12Q9BXU0 123 aa12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 MOV10Q9HCE1 1003 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 RANGRFQ9HD47 186 aaPredicted RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 TXNL4BQ9NX01 149 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 MRPS7Q9Y2R9 242 aaKnown RBP12.19□□□□□ -0.46
HMGCS1-201ENST00000325110 ABHD14A-ACY1A0A1B0GW23 586 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 OR6C70A6NIJ9 312 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 FAM183AA6NL82 134 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 PLOD3O60568 738 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 RPN2P04844 631 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 GJA8P48165 433 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 PAMR1Q6UXH9 720 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 UNC5DQ6UXZ4 953 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 ZER1Q7Z7L7 766 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 CCDC190Q86UF4 302 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 ATCAYQ86WG3 371 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 NLGN4YQ8NFZ3 816 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 OR4F15Q8NGB8 312 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 UFD1Q92890 307 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC35B4Q969S0 331 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 NEURL3Q96EH8 262 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 ZNF514Q96K75 400 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 C19orf43Q9BQ61 176 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC22A4Q9H015 551 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 TMEM245Q9H330 911 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 SCN3AQ9NY46 2000 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC9A3R1O14745 358 aaPredicted RBP12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 CPNE3O75131 537 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 APEX1P27695 318 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 SMSP52788 366 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 PCBP3P57721 371 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 ILKQ13418 452 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 VN1R5Q7Z5H4 357 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC30A8Q8IWU4 369 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 IL17RDQ8NFM7 739 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 ZCCHC10Q8TBK6 192 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 POF1BQ8WVV4 589 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 CITED4Q96RK1 184 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 CCDC32Q9BV29 185 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 LGR4Q9BXB1 951 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 RPRD1BQ9NQG5 326 aaKnown RBP12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 KLHL28Q9NXS3 571 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 NTNG1Q9Y2I2 539 aa12.18□□□□□ -0.46
HMGCS1-201ENST00000325110 HEPACAM2A8MVW5 462 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 ADH1CP00326 375 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC2A2P11168 524 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 CCL5P13501 91 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 PAICSP22234 425 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 MYL9P24844 172 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 ID2Q02363 134 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC9A5Q14940 896 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SLX4IPQ5VYV7 408 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SYCE2Q6PIF2 218 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 ASB18Q6ZVZ8 466 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 CPA6Q8N4T0 437 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 OR52I1Q8NGK6 324 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 OR52P1PQ8NH57 321 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 GOT1L1Q8NHS2 421 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 RASSF5Q8WWW0 418 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 ASB15Q8WXK1 588 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 VOPP1Q96AW1 172 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 OR2A14Q96R47 310 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 RAD9AQ99638 391 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 CSNK1G3Q9Y6M4 447 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SERTM1A2A2V5 107 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 H3BQ06 376 aaPredicted RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 LCMT2O60294 686 aaKnown RBP12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 HTR3AP46098 478 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 KCNJ5P48544 419 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 PDE7AQ13946 482 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 CAMK1Q14012 370 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 INSL4Q14641 139 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SYT14P1Q58G82 188 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 MFSD4BQ5TF39 518 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SLC27A4Q6P1M0 643 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 FAM92BQ6ZTR7 304 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 PDZD3Q86UT5 571 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 WACQ9BTA9 647 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 MS4A8Q9BY19 250 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 PLA2G12AQ9BZM1 189 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 GLIPR2Q9H4G4 154 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 NLKQ9UBE8 527 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 TBC1D24Q9ULP9 559 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 A0A1W2PS29 197 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SEMA7AO75326 666 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SERPINI2O75830 405 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 SOX18P35713 384 aa12.17□□□□□ -0.46
HMGCS1-201ENST00000325110 MTNR1AP48039 350 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms