RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 GPR155Q7Z3F1 870 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 TMCO2Q7Z6W1 182 aaPredicted RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 LRRTM4Q86VH4 590 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 C12orf40Q86WS4 652 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 OR51L1Q8NGJ5 315 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CNN2Q99439 309 aaKnown RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 KCNH6Q9H252 994 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 WASH6PQ9NQA3 447 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 HS3ST4Q9Y661 456 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 NAV3Q8IVL0 2385 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 ARHGEF28Q8N1W1 1705 aaKnown RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 TEX13CA0A0J9YWL9 993 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 SORBS2O94875 1100 aaKnown RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 SLC6A6P31641 620 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 TRAM2Q15035 370 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 WDR53Q7Z5U6 358 aaPredicted RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 NLRP8Q86W28 1048 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PNPLA2Q96AD5 504 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PIGVQ9NUD9 493 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 KNG1P01042 644 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 BEX5Q5H9J7 111 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PRR18Q8N4B5 295 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 ADAMTS10Q9H324 1103 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 TXNL4BQ9NX01 149 aaKnown RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 H7BY64 318 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 MT-ND4P03905 459 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 SLC10A6Q3KNW5 377 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PRAP1Q96NZ9 151 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 KCNJ16Q9NPI9 418 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 GPR52Q9Y2T5 361 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 OR8U9P0C7N5 309 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 SERPINF1P36955 418 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 APOFQ13790 326 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 ELP5Q8TE02 316 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CENPOQ9BU64 300 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 NELFAQ9H3P2 528 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 GCM1Q9NP62 436 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 MED6O75586 246 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PORP16435 677 aaPredicted RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 MLF1P58340 268 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 GOLM1Q8NBJ4 401 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 C16orf78Q8WTQ4 265 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 MKRN2Q9H000 416 aaKnown RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 Q9N2J8 555 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 FUOMA2VDF0 154 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 HCRTR2O43614 444 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 COQ9O75208 318 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 MGAT3Q09327 533 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 NOGQ13253 232 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 FBXL22Q6P050 247 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 ZNF705AQ6ZN79 300 aaPredicted RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 TMPRSS7Q7RTY8 843 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 OR4F6Q8NGB9 312 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PROKR1Q8TCW9 393 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 RAB11FIP5Q9BXF6 653 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 DNTTIP1Q9H147 329 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 SLAMF7Q9NQ25 335 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 IL37Q9NZH6 218 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 ROBO1Q9Y6N7 1651 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PBX2P40425 430 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 EIF2B1Q14232 305 aaKnown RBP7.56□□□□□ -1.2
CIITA-201ENST00000324288 CLCA4Q14CN2 919 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 KCNJ8Q15842 424 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 PNCKQ6P2M8 343 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 TMEM107Q6UX40 140 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 TMEM151BQ8IW70 566 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 RSC1A1Q92681 617 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 CMTM7Q96FZ5 175 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 ST6GALNAC5Q9BVH7 336 aa7.56□□□□□ -1.2
CIITA-201ENST00000324288 HRGP04196 525 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 NRIP1P48552 1158 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 ART1P52961 327 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 GHRHRQ02643 423 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 CAPNS2Q96L46 248 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 FOLH1BQ9HBA9 442 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SERTAD4Q9NUC0 356 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 NOCTQ9UK39 431 aaKnown RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 SCML2Q9UQR0 700 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 CACNA1HO95180 2353 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SMCHD1A6NHR9 2005 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 FEZF1A0PJY2 475 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 GABRDO14764 452 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 ENDOUP21128 410 aaKnown RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 RORAP35398 523 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SGSHP51688 502 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 ABHD18Q0P651 414 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 RNF111Q6ZNA4 994 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 GRASPQ7Z6J2 395 aaPredicted RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 ZER1Q7Z7L7 766 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 OR13J1Q8NGT2 312 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 OR4Q3Q8NH05 313 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 LINC01599Q8WXQ3 324 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 FAM46AQ96IP4 442 aaKnown RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 MFFQ9GZY8 342 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SNTB2Q13425 540 aaKnown RBP7.55□□□□□ -1.2
CIITA-201ENST00000324288 ZNF542PQ5EBM4 170 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 SLC5A11Q8WWX8 675 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 TGM7Q96PF1 710 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 PDCD1LG2Q9BQ51 273 aa7.55□□□□□ -1.2
CIITA-201ENST00000324288 BCO2Q9BYV7 579 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms