RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 TNFRSF4P43489 277 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 SLC48A1Q6P1K1 146 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 TMEM64Q6YI46 380 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 NUDT18Q6ZVK8 323 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 MFSD9Q8NBP5 474 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 ZG16BQ96DA0 208 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 LOC100506127A0A0U1RQW1 187 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 SH3D21A4FU49 640 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 CACNB4O00305 520 aaPredicted RBP19.41■□□□□ 0.7
TTC39C-202ENST00000317571 BTN3A3O00478 584 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 NTN1O95631 604 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 DNTTP04053 509 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 SERPINB10P48595 397 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 KHKP50053 298 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 ABATP80404 500 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 TARDBPQ13148 414 aaKnown RBP eCLIP19.41■□□□□ 0.7
TTC39C-202ENST00000317571 ZER1Q7Z7L7 766 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 MEX3DQ86XN8 651 aaKnown RBP19.41■□□□□ 0.7
TTC39C-202ENST00000317571 SHISA5Q8N114 240 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 OR9A2Q8NGT5 310 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 ZNF681Q96N22 645 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 BCL2L10Q9HD36 194 aa19.41■□□□□ 0.7
TTC39C-202ENST00000317571 CNOT2Q9NZN8 540 aaKnown RBP19.41■□□□□ 0.7
TTC39C-202ENST00000317571 ZNF624Q9P2J8 865 aaPredicted RBP19.41■□□□□ 0.7
TTC39C-202ENST00000317571 ISM1B1AKI9 464 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 CHRM5P08912 532 aaPredicted RBP19.4■□□□□ 0.7
TTC39C-202ENST00000317571 MMP11P24347 488 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 MC3RP41968 323 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 XKP51811 444 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 DLX2Q07687 328 aaPredicted RBP19.4■□□□□ 0.7
TTC39C-202ENST00000317571 LTB4RQ15722 352 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 PLAG1Q6DJT9 500 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 TMEM184AQ6ZMB5 413 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 MCFD2Q8NI22 146 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 RASSF5Q8WWW0 418 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 OR2M4Q96R27 311 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 KIR3DX1Q9H7L2 352 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 CLN6Q9NWW5 311 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 ZSCAN32Q9NX65 697 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 KLF15Q9UIH9 416 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 CHST2Q9Y4C5 530 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 EFCAB10A6NFE3 127 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 H3BN98 237 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 PROM1O43490 865 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 ZIC2O95409 532 aaPredicted RBP19.4■□□□□ 0.7
TTC39C-202ENST00000317571 LGI1O95970 557 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 EGFP01133 1207 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 RPLP0P05388 317 aaKnown RBP19.4■□□□□ 0.7
TTC39C-202ENST00000317571 UGT2B15P54855 530 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 SNRPGP62308 76 aaKnown RBP19.4■□□□□ 0.7
TTC39C-202ENST00000317571 DNASE1L3Q13609 305 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 SSX1Q16384 188 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 ATCAYQ86WG3 371 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 MORN4Q8NDC4 146 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 DACH2Q96NX9 599 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 CDCA3Q99618 268 aaPredicted RBP19.4■□□□□ 0.7
TTC39C-202ENST00000317571 POLR2J3Q9H1A7 115 aaKnown RBP19.4■□□□□ 0.7
TTC39C-202ENST00000317571 CLEC2DQ9UHP7 191 aa19.4■□□□□ 0.7
TTC39C-202ENST00000317571 TRBV23OR9-2A0A075B6M9 112 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 A0A1W2PRQ8 180 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 MPZL2O60487 215 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 UGT2B17O75795 530 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 ASGR2P07307 311 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 DBTP11182 482 aaKnown RBP19.39■□□□□ 0.69
TTC39C-202ENST00000317571 TGM1P22735 817 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 TFF2Q03403 129 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 TMEM31Q5JXX7 168 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 C19orf48Q6RUI8 117 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 ZNF367Q7RTV3 350 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 PAQR7Q86WK9 346 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 BBS10Q8TAM1 723 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 SFXN5Q8TD22 340 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 CHCHD6Q9BRQ6 235 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 CDADC1Q9BWV3 514 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 LMAN2LQ9H0V9 348 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 EQTNQ9NQ60 294 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 TMEM74BQ9NUR3 256 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 PAIP2BQ9ULR5 123 aaKnown RBP19.39■□□□□ 0.69
TTC39C-202ENST00000317571 GPR55Q9Y2T6 319 aaPredicted RBP19.39■□□□□ 0.69
TTC39C-202ENST00000317571 FRS3O43559 492 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 KCNJ13O60928 360 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 DNAJB6O75190 326 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 RPS3AP61247 264 aaKnown RBP19.39■□□□□ 0.69
TTC39C-202ENST00000317571 MED22Q15528 200 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 FBXO43Q4G163 708 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 TMEM201Q5SNT2 666 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 AMIGO1Q86WK6 493 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 SIMC1Q8NDZ2 872 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 OR4K5Q8NGD3 323 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 WDR36Q8NI36 951 aaKnown RBP19.39■□□□□ 0.69
TTC39C-202ENST00000317571 FLVCR1-AS1Q8TAF5 88 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 OR7D2Q96RA2 312 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 MGLLQ99685 303 aa19.39■□□□□ 0.69
TTC39C-202ENST00000317571 CEP290O15078 2479 aa19.38■□□□□ 0.69
TTC39C-202ENST00000317571 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.38■□□□□ 0.69
TTC39C-202ENST00000317571 TMEM221A6NGB7 291 aa19.38■□□□□ 0.69
TTC39C-202ENST00000317571 SLITRK5O94991 958 aa19.38■□□□□ 0.69
TTC39C-202ENST00000317571 HOXB2P14652 356 aa19.38■□□□□ 0.69
TTC39C-202ENST00000317571 TNNI3P19429 210 aa19.38■□□□□ 0.69
TTC39C-202ENST00000317571 CMPK1P30085 196 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms