RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ASB13Q8WXK3 278 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 MFRPQ9BY79 579 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TMPRSS13Q9BYE2 586 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 LRRN3Q9H3W5 708 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CCSER2Q9H7U1 834 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 NFKBIL1Q9UBC1 381 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PRG3Q9Y2Y8 225 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF175Q9Y473 711 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RPS10-NUDT3A0A1W2PQS6 291 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 C2orf78A6NCI8 922 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 GTPBP1O00178 669 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 KHNYNO15037 678 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CTSHP09668 335 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PRKACAP17612 351 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RAB3AP20336 220 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 EVI2BP34910 448 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 S100A12P80511 92 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 MAP2K5Q13163 448 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 HENMT1Q5T8I9 393 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 MOB2Q70IA6 237 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 FAM217AQ8IXS0 508 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 KRT78Q8N1N4 520 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 OR10Z1Q8NGY1 313 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PHYHIPQ92561 330 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 NEURL3Q96EH8 262 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ATF6BQ99941 703 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 JAM3Q9BX67 310 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 BRD9Q9H8M2 597 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 GPN1Q9HCN4 374 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 BCL2L10Q9HD36 194 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 KRCC1Q9NPI7 259 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 M0R129 80 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 AKR1A1P14550 325 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF250P15622 560 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SOX9P48436 509 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CLCNKAP51800 687 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CSTF1Q05048 431 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 C2orf80Q0P641 193 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 MAP4K2Q12851 820 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SNTB2Q13425 540 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 BCL2L15Q5TBC7 163 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 NAXDQ8IW45 347 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CCDC36Q8IYA8 594 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 OR6V1Q8N148 313 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 KCT2Q8NC54 265 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 KLHDC9Q8NEP7 349 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 OR2AP1Q8NGE2 309 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF354BQ96LW1 612 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SLC6A18Q96N87 628 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SPRTNQ9H040 489 aaPredicted RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PCDHB16Q9NRJ7 776 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CAMK2AQ9UQM7 478 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 L7N2F9 121 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 UBXN7O94888 489 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SERPINA3P01011 423 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SULT1A3P0DMM9 295 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SULT1A4P0DMN0 295 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 AHCYP23526 432 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RORAP35398 523 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RPS7P62081 194 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 SNRPD1P62314 119 aaKnown RBP4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CYP4F8P98187 520 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 RPA4Q13156 261 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 ANKS3Q6ZW76 656 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 BTN2A1Q7KYR7 527 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 FTMTQ8N4E7 242 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 OR52I1Q8NGK6 324 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 HASPINQ8TF76 798 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PTP4A1Q93096 173 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM19Q96HH6 336 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 MRI1Q9BV20 369 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CALML5Q9NZT1 146 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CACNG4Q9UBN1 327 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 NOD1Q9Y239 953 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 CROCCQ5TZA2 2017 aa4.53□□□□□ -1.68
PTPN13-201ENST00000316707 PHIPQ8WWQ0 1821 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 UBE2QL1A1L167 161 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PRAMEF25A6NGN4 478 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 FGBP02675 491 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 H2AFB2P0C5Z0 115 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 TGM4P49221 684 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 TPMTP51580 245 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PUDPQ08623 228 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 LDLRAD1Q5T700 205 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 METTL11BQ5VVY1 283 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 OVCH2Q7RTZ1 564 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 COMMD6Q7Z4G1 85 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 RASGRP3Q8IV61 690 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 GID4Q8IVV7 300 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ACBD7Q8N6N7 88 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SLC43A3Q8NBI5 491 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 OR4K1Q8NGD4 311 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PIGXQ8TBF5 258 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 RGMAQ96B86 450 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PRRC1Q96M27 445 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ABCG8Q9H221 673 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 HEXA-AS1Q9H8Q6 139 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 TBC1D17Q9HA65 648 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 BABAM2Q9NXR7 383 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 MALT1Q9UDY8 824 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms