RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 CHRNEQ04844 493 aa13.9□□□□□ -0.18
CLK4-201ENST00000316308 SSX1Q16384 188 aa13.9□□□□□ -0.18
CLK4-201ENST00000316308 TSTQ16762 297 aaKnown RBP13.9□□□□□ -0.18
CLK4-201ENST00000316308 GPAT3Q53EU6 434 aa13.9□□□□□ -0.18
CLK4-201ENST00000316308 ACSM5Q6NUN0 579 aa13.9□□□□□ -0.18
CLK4-201ENST00000316308 FAM111BQ6SJ93 734 aa13.9□□□□□ -0.18
CLK4-201ENST00000316308 TRMT61AQ96FX7 289 aaKnown RBP13.9□□□□□ -0.18
CLK4-201ENST00000316308 QRFPRQ96P65 431 aa13.9□□□□□ -0.18
CLK4-201ENST00000316308 C6orf62Q9GZU0 229 aaPredicted RBP13.9□□□□□ -0.18
CLK4-201ENST00000316308 P2RX2Q9UBL9 471 aa13.9□□□□□ -0.18
CLK4-201ENST00000316308 CAB39Q9Y376 341 aaPredicted RBP13.9□□□□□ -0.18
CLK4-201ENST00000316308 FANCMQ8IYD8 2048 aa13.9□□□□□ -0.19
CLK4-201ENST00000316308 PRKYO43930 277 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 CTSVO60911 334 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 EIF2DP41214 584 aaKnown RBP13.89□□□□□ -0.19
CLK4-201ENST00000316308 RGS21Q2M5E4 152 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 PRSS41Q7RTY9 318 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 OR2L5Q8NG80 312 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 MCFD2Q8NI22 146 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 WDR36Q8NI36 951 aaKnown RBP13.89□□□□□ -0.19
CLK4-201ENST00000316308 POLR2J3Q9H1A7 115 aaKnown RBP13.89□□□□□ -0.19
CLK4-201ENST00000316308 DSN1Q9H410 356 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 EGLN3Q9H6Z9 239 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 TVP23BQ9NYZ1 205 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 DAPK2Q9UIK4 370 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 MRPS2Q9Y399 296 aaKnown RBP13.89□□□□□ -0.19
CLK4-201ENST00000316308 ZNF888P0CJ79 500 aaPredicted RBP13.89□□□□□ -0.19
CLK4-201ENST00000316308 OSMP13725 252 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 NTSR1P30989 418 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 XKP51811 444 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 SRSF5Q13243 272 aaKnown RBP13.89□□□□□ -0.19
CLK4-201ENST00000316308 ZNF542PQ5EBM4 170 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 TJAP1Q5JTD0 557 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 CYP4Z2PQ8N1L4 340 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 DEPDC4Q8N2C3 294 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 OR4K5Q8NGD3 323 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 LCN9Q8WX39 176 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 BMFQ96LC9 184 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 GAS2L1Q99501 681 aaPredicted RBP13.89□□□□□ -0.19
CLK4-201ENST00000316308 PSD2Q9BQI7 771 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 IL20RAQ9UHF4 553 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 ADAM29Q9UKF5 820 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 ACAD8Q9UKU7 415 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 GPR52Q9Y2T5 361 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 WDFY3Q8IZQ1 3526 aa13.89□□□□□ -0.19
CLK4-201ENST00000316308 ARHGAP33O14559 1287 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 PROM1O43490 865 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 F3P13726 295 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 PVRP15151 417 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 TRHRP34981 398 aaPredicted RBP13.88□□□□□ -0.19
CLK4-201ENST00000316308 SOX18P35713 384 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 SLC15A1P46059 708 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 LIMK1P53667 647 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ZNF846Q147U1 533 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ZNF425Q6IV72 752 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 SLC48A1Q6P1K1 146 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 FBXO42Q6P3S6 717 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 AMIGO1Q86WK6 493 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ZNF761Q86XN6 746 aaPredicted RBP13.88□□□□□ -0.19
CLK4-201ENST00000316308 KIF18BQ86Y91 864 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 DNAJC5GQ8N7S2 189 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 SLC16A11Q8NCK7 471 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ELSPBP1Q96BH3 223 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 DHRS1Q96LJ7 313 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ZNF681Q96N22 645 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 TCEAL2Q9H3H9 227 aaPredicted RBP13.88□□□□□ -0.19
CLK4-201ENST00000316308 TRNAU1APQ9NX07 287 aaKnown RBP13.88□□□□□ -0.19
CLK4-201ENST00000316308 CNIH4Q9P003 139 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 CARD8Q9Y2G2 431 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 LOC105369274A0A096LPK9 316 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 LOC102723532A0A0G2JNH3 316 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 CACNB4O00305 520 aaPredicted RBP13.88□□□□□ -0.19
CLK4-201ENST00000316308 TLX2O43763 284 aaPredicted RBP13.88□□□□□ -0.19
CLK4-201ENST00000316308 DRD2P14416 443 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ZNF12P17014 697 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 GRK3P35626 688 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 MAGEA10P43363 369 aaPredicted RBP13.88□□□□□ -0.19
CLK4-201ENST00000316308 SIM1P81133 766 aaPredicted RBP13.88□□□□□ -0.19
CLK4-201ENST00000316308 SLC13A2Q13183 592 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 DEFB134Q4QY38 66 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 TMEM92Q6UXU6 159 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ZNF554Q86TJ5 538 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ATCAYQ86WG3 371 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 OR4N4Q8N0Y3 316 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 MORN4Q8NDC4 146 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 FAM46DQ8NEK8 389 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 KLHL6Q8WZ60 621 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 OR7D2Q96RA2 312 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 ZNF607Q96SK3 696 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 MGLLQ99685 303 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 SLC25A19Q9HC21 320 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 HMG20AQ9NP66 347 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 FBXO8Q9NRD0 319 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 MKLN1Q9UL63 735 aa13.88□□□□□ -0.19
CLK4-201ENST00000316308 PNMA8CA0A1B0GUJ8 204 aa13.87□□□□□ -0.19
CLK4-201ENST00000316308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.87□□□□□ -0.19
CLK4-201ENST00000316308 CPSF4LA6NMK7 179 aaKnown RBP13.87□□□□□ -0.19
CLK4-201ENST00000316308 A8MVJ9 347 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms