RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PGRMC2O15173 223 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 HBQ1P09105 142 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 FURINP09958 794 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 RANBP1P43487 201 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 CCR5P51681 352 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 DLX2Q07687 328 aaPredicted RBP12.93□□□□□ -0.34
DDX54-202ENST00000314045 CLCA4Q14CN2 919 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 NR0B2Q15466 257 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 SLC36A3Q495N2 470 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 FRMD1Q8N878 549 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 GNPDA2Q8TDQ7 276 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 RAB2BQ8WUD1 216 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 CHTF18Q8WVB6 975 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 AP3S1Q92572 193 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 TCTN2Q96GX1 697 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 ZNF583Q96ND8 569 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 CPPED1Q9BRF8 314 aaPredicted RBP12.93□□□□□ -0.34
DDX54-202ENST00000314045 PTGES2Q9H7Z7 377 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 ABCB10Q9NRK6 738 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 ZFR2Q9UPR6 939 aaKnown RBP12.93□□□□□ -0.34
DDX54-202ENST00000314045 USP22Q9UPT9 525 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 SPIN1Q9Y657 262 aaPredicted RBP12.93□□□□□ -0.34
DDX54-202ENST00000314045 TDRD15B5MCY1 1934 aaKnown RBP12.93□□□□□ -0.34
DDX54-202ENST00000314045 TRPM6Q9BX84 2022 aa12.93□□□□□ -0.34
DDX54-202ENST00000314045 NARSO43776 548 aaKnown RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 XPNPEP2O43895 674 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 CD36P16671 472 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 IL12AP29459 219 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 C6orf141Q5SZD1 244 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 SFTPA1Q8IWL2 248 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 C19orf47Q8N9M1 422 aaKnown RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 OR4K5Q8NGD3 323 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 PSMA8Q8TAA3 256 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 KIAA1143Q96AT1 154 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 TEX101Q9BY14 249 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 TNFRSF10DQ9UBN6 386 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 BRCA1P38398 1863 aaKnown RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 H0YJX3 145 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 M0R3H8 397 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 NUDT7P0C024 238 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 PCYT1AP49585 367 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 CRTC2Q53ET0 693 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 PERM1Q5SV97 790 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 SHISA6Q6ZSJ9 500 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 SPEM1Q8N4L4 309 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 SPHK1Q9NYA1 384 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 IGLV3-16A0A075B6K0 115 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 A0A1B0GTL3 188 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 A0A1W2PPC4 97 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 TSPAN11A1L157 253 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 CBLP22681 906 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 BCL6P41182 706 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 OR1D4P47884 311 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 PIN1Q13526 163 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 ANGPT1Q15389 498 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 SLC27A4Q6P1M0 643 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 SLC5A8Q8N695 610 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 METTL25Q8N6Q8 603 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 ZNF433Q8N7K0 673 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 OR5L2Q8NGL0 311 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 EZH1Q92800 747 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 TBC1D20Q96BZ9 403 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 LINC00615Q96LM1 132 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 CRB3Q9BUF7 120 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 PCDHA9Q9Y5H5 950 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 ARID1BQ8NFD5 2236 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 C17orf105B2RV13 164 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 TP53I11O14683 189 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 SLC6A6P31641 620 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 CDKN2CP42773 168 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 SLC9A3P48764 834 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 EMP2P54851 167 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 MVKQ03426 396 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 ERV3-1Q14264 604 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 ZBED5Q49AG3 693 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 TPRG1LQ5T0D9 272 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 ABHD17CQ6PCB6 329 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 ZC3H14Q6PJT7 736 aaKnown RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 WDR53Q7Z5U6 358 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 NUDT8Q8WV74 236 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 CNDP2Q96KP4 475 aaKnown RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 ZNF300Q96RE9 604 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 TRPV4Q9HBA0 871 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 PLGRKTQ9HBL7 147 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 NEK6Q9HC98 313 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 LTB4R2Q9NPC1 389 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 C1GALT1Q9NS00 363 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 ZNF624Q9P2J8 865 aaPredicted RBP12.92□□□□□ -0.34
DDX54-202ENST00000314045 ERVK-19Q9WJR5 959 aa12.92□□□□□ -0.34
DDX54-202ENST00000314045 MBTPS2O43462 519 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 ELK4P28324 431 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 FNTBP49356 437 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 MXD1Q05195 221 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 CCINQ13939 588 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 IHHQ14623 411 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 PON3Q15166 354 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 KLHL24Q6TFL4 600 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 ARL14Q8N4G2 192 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 MARVELD2Q8N4S9 558 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 TMEM234Q8WY98 164 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms