RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SLC22A15Q8IZD6 547 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 OR51D1Q8NGF3 324 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 FIBINQ8TAL6 211 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 DAZLQ92904 295 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 CMKLR1Q99788 373 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 COMMD3Q9UBI1 195 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF69Q9UC07 566 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 FAM170BA6NMN3 283 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 MUSKO15146 869 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 GPX3P22352 226 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ASAH1Q13510 395 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 SLC18B1Q6NT16 456 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ARL14Q8N4G2 192 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 SAMD12Q8N8I0 201 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ARMC5Q96C12 935 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF334Q9HCZ1 680 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 TAS2R3Q9NYW6 316 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 OR6C2Q9NZP2 312 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 MOKQ9UQ07 419 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 TRIM64A6NGJ6 449 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 H7C417 338 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 GJA1P17302 382 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 CXCR1P25024 350 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 PRKAG1P54619 331 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 WDR5P61964 334 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 RPP30P78346 268 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 MAD2L1BPQ15013 274 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 TBC1D25Q3MII6 688 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 CMTR2Q8IYT2 770 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF433Q8N7K0 673 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 EXOSC8Q96B26 276 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ELP4Q96EB1 424 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF300Q96RE9 604 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 QPCTLQ9NXS2 382 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 CEPT1Q9Y6K0 416 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 SOWAHBA6NEL2 793 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 NIPSNAP2O75323 286 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 FSHRP23945 695 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 BDKRB1P46663 353 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 MRPL49Q13405 166 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM173Q86WV6 379 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 GHDCQ8N2G8 530 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 SHDQ96IW2 340 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 RXFP3Q9NSD7 469 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 FKTNO75072 461 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 USP2O75604 605 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 CAPN3P20807 821 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 SLC7A9P82251 487 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 KIR2DS3Q14952 304 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 PON2Q15165 354 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 RNF19BQ6ZMZ0 732 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 OR2L5Q8NG80 312 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 GSTO2Q9H4Y5 243 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 PIH1D1Q9NWS0 290 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 RNF150Q9ULK6 438 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 BTBD17A6NE02 478 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 IFNA17P01571 189 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 CASRP41180 1078 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 HSD17B7P56937 341 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 RBMS2Q15434 407 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 KCTD11Q693B1 232 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 CDRT4Q8N9R6 151 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 FBXO15Q8NCQ5 510 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 LILRB4Q8NHJ6 448 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 TBC1D15Q8TC07 691 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 NMUR1Q9HB89 426 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 SOHLH2Q9NX45 425 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 TVP23BQ9NYZ1 205 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ARL5AQ9Y689 179 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 USP3Q9Y6I4 520 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 A0A0G2JMP0 313 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 FAM221BA6H8Z2 402 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 DRGXA6NNA5 263 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TP53I11O14683 189 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 FANCGO15287 622 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 MSI1O43347 362 aaKnown RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TLX2O43763 284 aaPredicted RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 OR7A10O76100 309 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 SNAP29O95721 258 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 SYPP08247 313 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 CRABP1P29762 137 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF81P51508 661 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 PKDCCQ504Y2 493 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TIGD5Q53EQ6 642 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 UBE2UQ5VVX9 321 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 CD276Q5ZPR3 534 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM64Q6YI46 380 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 OR4M2Q8NGB6 313 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 RPL3LQ92901 407 aaKnown RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 MED18Q9BUE0 208 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 GAREM1Q9H706 876 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 GRHPRQ9UBQ7 328 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 DENND4CQ5VZ89 1909 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF806P0C7X5 589 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 SLC35D3Q5M8T2 416 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM198Q66K66 360 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 NSUN3Q9H649 340 aaKnown RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 SLC6A14Q9UN76 642 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM212A6NML5 194 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms