RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TREX2Q9BQ50 279 aaPredicted RBP11.15□□□□□ -0.62
TRIM40-205ENST00000307859 TOR3AQ9H497 397 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 SOX17Q9H6I2 414 aaPredicted RBP11.15□□□□□ -0.62
TRIM40-205ENST00000307859 RUBCNLQ9H714 662 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 ANKHQ9HCJ1 492 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 ENAMQ9NRM1 1142 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 LRIT1Q9P2V4 623 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 C3orf18Q9UK00 162 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 PLCL2Q9UPR0 1127 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 GPC6Q9Y625 555 aaPredicted RBP11.15□□□□□ -0.62
TRIM40-205ENST00000307859 FER1L5A0AVI2 2057 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 IGHV5-51A0A0C4DH38 117 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 H3BNH8 94 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 SGK494L7N484 410 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 HS6ST1O60243 411 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 FGF17O60258 216 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 RDH16O75452 317 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 DNAJB5O75953 348 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 SLITRK5O94991 958 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 MED26O95402 600 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 ATP1B1P05026 303 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 NR2F1P10589 423 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 GNSP15586 552 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 GLB1P16278 677 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 PORP16435 677 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-205ENST00000307859 RRM2P31350 389 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 SOX18P35713 384 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 MLLT3P42568 568 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-205ENST00000307859 GPR3P46089 330 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 XCR1P46094 333 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 DHPSP49366 369 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-205ENST00000307859 CRISP3P54108 245 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 PRKAG1P54619 331 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 RAD23AP54725 363 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 SKP1P63208 163 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 KCNC4Q03721 635 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 FAM53BQ14153 422 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 GNA13Q14344 377 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 NDUFA9Q16795 377 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 DUSP7Q16829 419 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF628Q5EBL2 1059 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 KDM4DQ6B0I6 523 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 FAM111BQ6SJ93 734 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 SLC44A2Q8IWA5 706 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-205ENST00000307859 OR2L13Q8N349 312 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 SMYD1Q8NB12 490 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 OR4C15Q8NGM1 316 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 OR9A4Q8NGU2 314 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 XAGE5Q8WWM1 108 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 RASSF5Q8WWW0 418 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 KAT2AQ92830 837 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 ZDHHC12Q96GR4 267 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 OR7D2Q96RA2 312 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF607Q96SK3 696 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 BTBD2Q9BX70 525 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 RSPO3Q9BXY4 272 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-205ENST00000307859 ACTRT3Q9BYD9 372 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 AMBRA1Q9C0C7 1298 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 PTGFRNQ9P2B2 879 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 MYRFQ9Y2G1 1151 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 PCDHGB3Q9Y5G1 929 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 LYVE1Q9Y5Y7 322 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 ENPP4Q9Y6X5 453 aa11.14□□□□□ -0.63
TRIM40-205ENST00000307859 COL5A1P20908 1838 aaPredicted RBP11.14□□□□□ -0.63
TRIM40-205ENST00000307859 FRYLO94915 3013 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 IGHV1OR21-1A0A087WYE8 117 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 TRIM64A6NGJ6 449 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 C1QTNF9BB2RNN3 333 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 TAF4O00268 1085 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 FOXS1O43638 330 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SERPINB7O75635 380 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ZBTB11O95625 1053 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 GPR75O95800 540 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 CLIC3O95833 236 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 FESP07332 822 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 CHRM4P08173 479 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ITGAMP11215 1152 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ETS2P15036 469 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 IGFBP5P24593 272 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 OR1E2P47887 323 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 KCNJ5P48544 419 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ARRB1P49407 418 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ZIK1Q3SY52 487 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 KCTD21Q4G0X4 260 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 FHL5Q5TD97 284 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 GARNL3Q5VVW2 1013 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 TTC23Q5W5X9 447 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 MFSD12Q6NUT3 480 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 CDC73Q6P1J9 531 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 FAHD1Q6P587 224 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 KANSL1Q7Z3B3 1105 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF605Q86T29 641 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 CYP4Z1Q86W10 505 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 KRT73Q86Y46 540 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 OR4N5Q8IXE1 308 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 SHISA5Q8N114 240 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 TTC29Q8NA56 475 aaPredicted RBP11.13□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF675Q8TD23 568 aa11.13□□□□□ -0.63
TRIM40-205ENST00000307859 NCSTNQ92542 709 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms