RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 AGR2O95994 175 aa13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 CTSBP07858 339 aa13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 CYP4B1P13584 511 aa13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 CWF19L1Q69YN2 538 aaKnown RBP13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 WDR53Q7Z5U6 358 aaPredicted RBP13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 THAP5Q7Z6K1 395 aa13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 METTL27Q8N6F8 245 aaPredicted RBP13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 PEX11GQ96HA9 241 aa13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 EPB41L1Q9H4G0 881 aa13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 TMEM74BQ9NUR3 256 aa13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 CHCHD3Q9NX63 227 aaKnown RBP13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 TMCC3Q9ULS5 477 aa13.62□□□□□ -0.23
SHCBP1-201ENST00000303383 ZDBF2Q9HCK1 2354 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 A8MU76 341 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 RHCEP18577 417 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 FAM214AQ32MH5 1076 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 FGD3Q5JSP0 725 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 SLC25A45Q8N413 288 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 BARD1Q99728 777 aaKnown RBP13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 AMBRA1Q9C0C7 1298 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 PI4KAP42356 2102 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 A0A0G2JPF8 293 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 LOC100130705A0A1B0GUX0 176 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 CCDC160A6NGH7 325 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 HNRNPCL2B2RXH8 293 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 HNRNPCL3B7ZW38 293 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 H3BNH8 94 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 MITFO75030 526 aaPredicted RBP13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 NME6O75414 186 aaPredicted RBP13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 CDC123O75794 336 aaPredicted RBP13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 HNRNPCL4P0DMR1 293 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 HOXA6P31267 233 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 GRM7Q14831 915 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 PRTGQ2VWP7 1150 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 RNF220Q5VTB9 566 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 MAMSTRQ6ZN01 415 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 OLIG3Q7RTU3 272 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 HMGN2P46Q86SG4 172 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 WDR5BQ86VZ2 330 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 GATAD2AQ86YP4 633 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 LGI4Q8N135 537 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 PIK3C3Q8NEB9 887 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 ZNF354BQ96LW1 612 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 SYNDIG1Q9H7V2 258 aa13.61□□□□□ -0.23
SHCBP1-201ENST00000303383 IGHV1OR21-1A0A087WYE8 117 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 J3KTA2 159 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 CYR61O00622 381 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 BCKDKO14874 412 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 UGT2B11O75310 529 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 MYF5P13349 255 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 ALAS2P22557 587 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 PMS2CLQ68D20 193 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 FAM111BQ6SJ93 734 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 GPR135Q8IZ08 494 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 OR10G2Q8NGC3 310 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 RBM18Q96H35 190 aaKnown RBP13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 GRIP2Q9C0E4 1043 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 GABARAPL1Q9H0R8 117 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 RHCGQ9UBD6 479 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 LYVE1Q9Y5Y7 322 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 EML5Q05BV3 1969 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 DNAJB5O75953 348 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 OR2B3O76000 313 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 ALPPP05187 535 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 ETS2P15036 469 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 RPL5P46777 297 aaKnown RBP13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 DAPP51397 102 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 IL5RAQ01344 420 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 GARNL3Q5VVW2 1013 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 MIPOL1Q8TD10 442 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 EDAQ92838 391 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 CACNA1EQ15878 2313 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 CPED1A4D0V7 1026 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 TMEM229AB2RXF0 380 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 ASNA1O43681 348 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 DPM1O60762 260 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 KCNJ5P48544 419 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 GPLD1P80108 840 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 EXOC3L2Q2M3D2 409 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 TRMT12Q53H54 448 aaKnown RBP13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 MFSD12Q6NUT3 480 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 TMEM52Q8NDY8 209 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 SETD9Q8NE22 299 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 OR6C4Q8NGE1 309 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 GAB3Q8WWW8 586 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 DUSP23Q9BVJ7 150 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 KLHL28Q9NXS3 571 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 GMPPBQ9Y5P6 360 aa13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 GPC6Q9Y625 555 aaPredicted RBP13.6□□□□□ -0.23
SHCBP1-201ENST00000303383 ASXL3Q9C0F0 2248 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 TMEM150CB9EJG8 249 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 CHRM4P08173 479 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 GPR3P46089 330 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 HSD11B2P80365 405 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 MAT1AQ00266 395 aaKnown RBP13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 FAM53BQ14153 422 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 KCNAB1Q14722 419 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 ZNF311Q5JNZ3 666 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 CDC73Q6P1J9 531 aa13.59□□□□□ -0.23
SHCBP1-201ENST00000303383 SLC16A11Q8NCK7 471 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms