RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SNTA1Q13424 505 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 SYPL1Q16563 259 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 BICRALQ6AI39 1079 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 GRHL2Q6ISB3 625 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 METTL2BQ6P1Q9 378 aaKnown RBP13.88□□□□□ -0.19
COL6A2-201ENST00000300527 CHST9Q7L1S5 443 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 RRM2BQ7LG56 351 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 SMG7Q92540 1137 aaKnown RBP13.88□□□□□ -0.19
COL6A2-201ENST00000300527 GPA33Q99795 319 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 MARVELD1Q9BSK0 173 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 THAP7Q9BT49 309 aaPredicted RBP13.88□□□□□ -0.19
COL6A2-201ENST00000300527 RBCK1Q9BYM8 510 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 TTTY10Q9BZA0 68 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 BHLHE41Q9C0J9 482 aaPredicted RBP13.88□□□□□ -0.19
COL6A2-201ENST00000300527 CDH10Q9Y6N8 788 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 POM121CA8CG34 1229 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 GABRPO00591 440 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 LIMS1P48059 325 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 GALEQ14376 348 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 RAET1GQ6H3X3 334 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 FAM181AQ8N9Y4 354 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 OR11H7Q8NGC8 314 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 TEX47Q8TBZ9 253 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 TMEM163Q8TC26 289 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 KAT2AQ92830 837 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 RFT1Q96AA3 541 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 TEFMQ96QE5 360 aaKnown RBP13.88□□□□□ -0.19
COL6A2-201ENST00000300527 C1QTNF7Q9BXJ2 289 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 QRSL1Q9H0R6 528 aaKnown RBP13.88□□□□□ -0.19
COL6A2-201ENST00000300527 FBXO9Q9UK97 447 aaPredicted RBP13.88□□□□□ -0.19
COL6A2-201ENST00000300527 SCML1Q9UN30 329 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 PCDHGB7Q9Y5F8 929 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 NUMA1Q14980 2115 aa13.88□□□□□ -0.19
COL6A2-201ENST00000300527 FAAHO00519 579 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 M6PRP20645 277 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 CCR6P51684 374 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 EPHA5P54756 1037 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 CDH11P55287 796 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 EXOSC2Q13868 293 aaKnown RBP13.87□□□□□ -0.19
COL6A2-201ENST00000300527 TXNDC8Q6A555 127 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 SLC30A6Q6NXT4 461 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 QSOX2Q6ZRP7 698 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 TPRG1Q6ZUI0 275 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 ZER1Q7Z7L7 766 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 SPNS1Q9H2V7 528 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 RABL2AQ9UBK7 228 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-201ENST00000300527 ADAM30Q9UKF2 790 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 NUP50Q9UKX7 468 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-201ENST00000300527 FAM183AA6NL82 134 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 SHOXO15266 292 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 ANXA3P12429 323 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 DNASE1P24855 282 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 GIFP27352 417 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 HMGA2P52926 109 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 ACLYP53396 1101 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 CTSCP53634 463 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 C12orf73Q69YU5 71 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 IMP3Q9NV31 184 aaKnown RBP13.87□□□□□ -0.19
COL6A2-201ENST00000300527 PLAGL1Q9UM63 463 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 DYRK1BQ9Y463 629 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 TEX13CA0A0J9YWL9 993 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 CD70P32970 193 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 SLC11A1P49279 550 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 CNTN1Q12860 1018 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 TMEM65Q6PI78 240 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 ZBTB44Q8NCP5 570 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 DUSP18Q8NEJ0 188 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 SPRYD4Q8WW59 207 aaPredicted RBP13.87□□□□□ -0.19
COL6A2-201ENST00000300527 SECISBP2Q96T21 854 aaKnown RBP13.87□□□□□ -0.19
COL6A2-201ENST00000300527 ARHGAP39Q9C0H5 1083 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 TAS2R7Q9NYW3 318 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 STOML2Q9UJZ1 356 aa13.87□□□□□ -0.19
COL6A2-201ENST00000300527 OTOFQ9HC10 1997 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 SYN3O14994 580 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 RAF1P04049 648 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 ZDHHC11BP0C7U3 371 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 IMPA1P29218 277 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 TBPL1P62380 186 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 PCDH1Q08174 1060 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 TAF1CQ15572 869 aaPredicted RBP13.86□□□□□ -0.19
COL6A2-201ENST00000300527 SLC24A5Q71RS6 500 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 GPR135Q8IZ08 494 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 TTC9Q92623 222 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 PLD4Q96BZ4 506 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 IL17FQ96PD4 163 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 MCOLN1Q9GZU1 580 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL6A2-201ENST00000300527 RWDD3Q9Y3V2 267 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 CHD5Q8TDI0 1954 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 GFYI3L273 518 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 LGI1O95970 557 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 ETV3P41162 512 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 TAGLNQ01995 201 aaKnown RBP13.86□□□□□ -0.19
COL6A2-201ENST00000300527 LDLRAD1Q5T700 205 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 WASH2PQ6VEQ5 465 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 IZUMO1Q8IYV9 350 aa13.86□□□□□ -0.19
COL6A2-201ENST00000300527 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms