RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 NRARPQ7Z6K4 114 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 NATD1Q8N6N6 113 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 OR8K5Q8NH50 307 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 ZG16BQ96DA0 208 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 C12orf66Q96MD2 445 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 C3orf14Q9HBI5 128 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 SLC35C2Q9NQQ7 365 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 CRNNQ9UBG3 495 aaPredicted RBP12.84□□□□□ -0.35
BCCIP-202ENST00000299130 SEC14L4Q9UDX3 406 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 FBXW2Q9UKT8 454 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 WBP11Q9Y2W2 641 aaKnown RBP12.84□□□□□ -0.35
BCCIP-202ENST00000299130 MN1Q10571 1320 aaPredicted RBP12.84□□□□□ -0.35
BCCIP-202ENST00000299130 LINC00854A0A1B0GVQ3 168 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 A0A1W2PR48 441 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 HYKKA2RU49 373 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 MAN2B1O00754 1011 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 SLC35G4P0C7Q5 338 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 BUD31P41223 144 aaPredicted RBP12.84□□□□□ -0.35
BCCIP-202ENST00000299130 EFNB1P98172 346 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 CDK5Q00535 292 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 HYAL2Q12891 473 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 MADCAM1Q13477 382 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 ATAT1Q5SQI0 421 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 KIAA1161Q6NSJ0 714 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 FAM92BQ6ZTR7 304 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 USP30Q70CQ3 517 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 SHFQ7M4L6 423 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 CCDC116Q8IYX3 515 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 SLC7A5P1Q8MH63 180 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 FAM26EQ8N5C1 309 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 PROKR2Q8NFJ6 384 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 OR2A1Q8NGT9 310 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 CNRIP1Q96F85 164 aaPredicted RBP12.84□□□□□ -0.35
BCCIP-202ENST00000299130 POLDIP3Q9BY77 421 aaKnown RBP12.84□□□□□ -0.35
BCCIP-202ENST00000299130 TAS2R7Q9NYW3 318 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 TESQ9UGI8 421 aaKnown RBP12.84□□□□□ -0.35
BCCIP-202ENST00000299130 SERGEFQ9UGK8 458 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 KCNK6Q9Y257 313 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 KLHL20Q9Y2M5 609 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 GPR55Q9Y2T6 319 aaPredicted RBP12.84□□□□□ -0.35
BCCIP-202ENST00000299130 ATG4BQ9Y4P1 393 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 DENND4AQ7Z401 1863 aa12.84□□□□□ -0.35
BCCIP-202ENST00000299130 TBC1D3BA6NDS4 549 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 AGRPO00253 132 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 MYL12BO14950 172 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 DYRK3O43781 588 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 CDRT1O95170 752 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 PCDH8O95206 1070 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 CD79BP40259 229 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 RFX2P48378 723 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 RORCP51449 518 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 IFITM2Q01629 132 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 ALDH6A1Q02252 535 aaKnown RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 MLLT11Q13015 90 aaPredicted RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 SLAMF1Q13291 335 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 MLC1Q15049 377 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 C18orf63Q68DL7 685 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 SCAIQ8N9R8 606 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 RASSF5Q8WWW0 418 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 SUSD6Q92537 303 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 NT5DC2Q9H857 520 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 MARCH7Q9H992 704 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 IMP3Q9NV31 184 aaKnown RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 TXNL4BQ9NX01 149 aaKnown RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 KLHL3Q9UH77 587 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 TRAPPC4Q9Y296 219 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 TRPM6Q9BX84 2022 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 MID1O15344 667 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 LGI1O95970 557 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 MSL3P1P0C860 447 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 DDX5P17844 614 aaKnown RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 TIE1P35590 1138 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 SMIM11AP58511 58 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 DEFA1P59665 94 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 DEFA3P59666 94 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 PSPHP78330 225 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 MLLT1Q03111 559 aaPredicted RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 PRDX1Q06830 199 aaKnown RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 LARS2Q15031 903 aaKnown RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 C22orf42Q6IC83 251 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 C1orf94Q6P1W5 598 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 TMEM107Q6UX40 140 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 OR8D4Q8NGM9 314 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 OR9Q1Q8NGQ5 310 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 JPH3Q8WXH2 748 aaPredicted RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 TM9SF4Q92544 642 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 CAMK1GQ96NX5 476 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 BBS4Q96RK4 519 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 CCDC32Q9BV29 185 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 HDAC8Q9BY41 377 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 POLMQ9NP87 494 aaPredicted RBP12.83□□□□□ -0.36
BCCIP-202ENST00000299130 TIGARQ9NQ88 270 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 ADAM29Q9UKF5 820 aa12.83□□□□□ -0.36
BCCIP-202ENST00000299130 DIMT1Q9UNQ2 313 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms