RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 DNAJC22Q8N4W6 341 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 TMEM105Q8N8V8 129 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 OR4M2Q8NGB6 313 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 OR10A6Q8NH74 314 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 DNAJB8Q8NHS0 232 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 C9orf43Q8TAL5 461 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 METTL6Q8TCB7 284 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 GIMAP1Q8WWP7 306 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PATE1Q8WXA2 126 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 DNASE2BQ8WZ79 361 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 METTL2AQ96IZ6 378 aaKnown RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 HRASLS5Q96KN8 279 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 HSPA12BQ96MM6 686 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 UCK2Q9BZX2 261 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 SPNS1Q9H2V7 528 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 TMEM74BQ9NUR3 256 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.29□□□□□ -1.4
TMC1-201ENST00000297784 CACNA1EQ15878 2313 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 ADAMTS9Q9P2N4 1935 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 TRBV5-3A0A0A0MS03 114 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 A0A0B4J293 547 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 FFAR3O14843 346 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 GPR42O15529 346 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PRICKLE3O43900 615 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 RASGRP1O95267 797 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 CLDN9O95484 217 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 SLC35G4P0C7Q5 338 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PSMB5P28074 263 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 GZMMP51124 257 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 MAPK12P53778 367 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 CD83Q01151 205 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 MFSD13AQ14CX5 517 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 ZNF79Q15937 498 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 BAK1Q16611 211 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 CPSF6Q16630 551 aaKnown RBP eCLIP6.29□□□□□ -1.4
TMC1-201ENST00000297784 GGTA1PQ4G0N0 100 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 SLC35F1Q5T1Q4 408 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PXDC1Q5TGL8 231 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 OR2T5Q6IEZ7 315 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 WASH2PQ6VEQ5 465 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 SLCO4C1Q6ZQN7 724 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 TRIM46Q7Z4K8 759 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 DCUN1D3Q8IWE4 304 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 FNDC5Q8NAU1 212 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 GLB1L3Q8NCI6 653 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 OR2T29Q8NH02 315 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 WDR20Q8TBZ3 569 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 CHTF18Q8WVB6 975 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 KIAA1143Q96AT1 154 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 RAD51AP1Q96B01 352 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 MTFMTQ96DP5 389 aaKnown RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 RNF31Q96EP0 1072 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 ZC3HAV1LQ96H79 300 aaKnown RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 DUSP15Q9H1R2 295 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 WASH6PQ9NQA3 447 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PLSCR2Q9NRY7 297 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 DNAJC11Q9NVH1 559 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 ZNF490Q9ULM2 529 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 KCNE2Q9Y6J6 123 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 LOC100506127A0A0U1RQW1 187 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 A0A1W2PQ09 198 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 CLCA1A8K7I4 914 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 NDUFA2O43678 99 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 KIAA0513O60268 411 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PDE9AO76083 593 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 TBX6O95947 436 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 PDYNP01213 254 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 SEMG1P04279 462 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 IDSP22304 550 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 CD38P28907 300 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PEBP1P30086 187 aaKnown RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 SLC19A1P41440 591 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 FNTBP49356 437 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PPP1R8Q12972 351 aaKnown RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 DOC2AQ14183 400 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 BTBD16Q32M84 506 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 RFTN2Q52LD8 501 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 ZBTB37Q5TC79 503 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 RNF165Q6ZSG1 346 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 CEP68Q76N32 757 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 ZDHHC21Q8IVQ6 265 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 RGL4Q8IZJ4 473 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 NAGSQ8N159 534 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 OR52E1Q8NGJ3 308 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 NUDT8Q8WV74 236 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 SLC13A3Q8WWT9 602 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 GGHQ92820 318 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 KLHDC7BQ96G42 594 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 MAGEB10Q96LZ2 347 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 ZNF578Q96N58 590 aaPredicted RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 CAMK1GQ96NX5 476 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 FERD3LQ96RJ6 166 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 BARD1Q99728 777 aaKnown RBP6.29□□□□□ -1.4
TMC1-201ENST00000297784 MFRPQ9BY79 579 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 PCED1AQ9H1Q7 454 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 MMP28Q9H239 520 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 XKR8Q9H6D3 395 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 RNF167Q9H6Y7 350 aa6.29□□□□□ -1.4
TMC1-201ENST00000297784 IL1RAPQ9NPH3 570 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms