RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MRPS26Q9BYN8 205 aaKnown RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 GAREM1Q9H706 876 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 TMEM9Q9P0T7 183 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 P2RX2Q9UBL9 471 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 ABCG2Q9UNQ0 655 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 PADI2Q9Y2J8 665 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 U3KQA8 63 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 SPTBP11277 2137 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 RP1P56715 2156 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 PRAMEF27A3QJZ7 478 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 C5orf58C9J3I9 102 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 FAM227AF5H4B4 570 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 H3BMH7 237 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 GNGT2O14610 69 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 OPN1SWP03999 348 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 ATP1B1P05026 303 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 IFI6P09912 130 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 PRKAG1P54619 331 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 SQSTM1Q13501 440 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 LASP1Q14847 261 aaKnown RBP14.58□□□□□ -0.08
LSM6-201ENST00000296581 NR0B2Q15466 257 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 C6orf52Q5T4I8 152 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 DHRS4L2Q6PKH6 230 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 TBPL2Q6SJ96 375 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 KMT5CQ86Y97 462 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 D2HGDHQ8N465 521 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 OR7G2Q8NG99 324 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 OR5D16Q8NGK9 328 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 KAT2AQ92830 837 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 GIMAP5Q96F15 307 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 SPRTNQ9H040 489 aaPredicted RBP14.58□□□□□ -0.08
LSM6-201ENST00000296581 USP34Q70CQ2 3546 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 UNC13CQ8NB66 2214 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 DPM1O60762 260 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 LDB3O75112 727 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 SOX18P35713 384 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 MAN2A2P49641 1150 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 GRM7Q14831 915 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 ZNF628Q5EBL2 1059 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 OR2T5Q6IEZ7 315 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 ZDHHC13Q8IUH4 622 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 LGI4Q8N135 537 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 OR2L13Q8N349 312 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 ZBTB44Q8NCP5 570 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 OR2T29Q8NH02 315 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 OR5K1Q8NHB7 308 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 ADAMTS18Q8TE60 1221 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 ANKRD9Q96BM1 317 aaPredicted RBP14.58□□□□□ -0.08
LSM6-201ENST00000296581 PTGFRNQ9P2B2 879 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 TRPC4Q9UBN4 977 aa14.58□□□□□ -0.08
LSM6-201ENST00000296581 ADAMTS20P59510 1910 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 BLACEA4D250 179 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 hCG_2039718K7EN88 272 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 ASNA1O43681 348 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 SIGLEC6O43699 453 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 PDE9AO76083 593 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 SLITRK5O94991 958 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 RNH1P13489 461 aaKnown RBP14.57□□□□□ -0.08
LSM6-201ENST00000296581 DCTP40126 519 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 IST1P53990 364 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 ITGA1P56199 1179 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 DAG1Q14118 895 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 KCNAB1Q14722 419 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 IFI44LQ53G44 452 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 RPS26P11Q5JNZ5 115 aaPredicted RBP14.57□□□□□ -0.08
LSM6-201ENST00000296581 ARMC8Q8IUR7 673 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 XAGE5Q8WWM1 108 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 COL26A1Q96A83 441 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 C16orf58Q96GQ5 468 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 NEURL2Q9BR09 285 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 RAB23Q9ULC3 237 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 SLC6A14Q9UN76 642 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 CLCA2Q9UQC9 943 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 VCANP13611 3396 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 G3V2T6 193 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 HPRP00739 348 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 MSL3P1P0C860 447 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 SEPHS1P49903 392 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 BCAP31P51572 246 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 ALDH3A2P51648 485 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 ARSFP54793 590 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 ID2Q02363 134 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 SYPL1Q16563 259 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 FHL5Q5TD97 284 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 TSEN54Q7Z6J9 526 aaKnown RBP14.57□□□□□ -0.08
LSM6-201ENST00000296581 TMEM179BQ7Z7N9 219 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 ERI1Q8IV48 349 aaKnown RBP14.57□□□□□ -0.08
LSM6-201ENST00000296581 CHERPQ8IWX8 916 aaKnown RBP14.57□□□□□ -0.08
LSM6-201ENST00000296581 ZNF675Q8TD23 568 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 MS4A4EQ96PG1 132 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 NUDT22Q9BRQ3 303 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 BCL2L10Q9HD36 194 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 VNN3Q9NY84 501 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 BAG5Q9UL15 447 aa14.57□□□□□ -0.08
LSM6-201ENST00000296581 A0A087WV62 115 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 PATE3B3GLJ2 98 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 H0YIG0 161 aa14.56□□□□□ -0.08
LSM6-201ENST00000296581 TOX3O15405 576 aaPredicted RBP14.56□□□□□ -0.08
LSM6-201ENST00000296581 SLC28A2O43868 658 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms