RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 CKAP4Q07065 602 aaKnown RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 SF3B4Q15427 424 aaKnown RBP eCLIP17.93■□□□□ 0.465e-6■■■□□ 18.2
CXCL3-201ENST00000296026 NNATQ16517 81 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 TSNAXIP1Q2TAA8 658 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 PRICKLE4Q2TBC4 344 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 GGTA1PQ4G0N0 100 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 WIPI1Q5MNZ9 446 aaPredicted RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 SLC48A1Q6P1K1 146 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 FAM111BQ6SJ93 734 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 RPS27LQ71UM5 84 aaKnown RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 COMMD6Q7Z4G1 85 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 RELL1Q8IUW5 271 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 VWA5B2Q8N398 1253 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 TRPC4APQ8TEL6 797 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 RNASE6Q93091 150 aaKnown RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 HSPBAP1Q96EW2 488 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 TMEM41AQ96HV5 264 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 FUT8Q9BYC5 575 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 CLEC4MQ9H2X3 399 aaPredicted RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 LIME1Q9H400 295 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 RASSF1Q9NS23 344 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 FARSBQ9NSD9 589 aaKnown RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 CCM2LQ9NUG4 571 aaPredicted RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 ZNF629Q9UEG4 869 aaPredicted RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 MTRF1LQ9UGC7 380 aaKnown RBP17.93■□□□□ 0.46
CXCL3-201ENST00000296026 BCAP29Q9UHQ4 241 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 CES1P1Q9UKY3 287 aa17.93■□□□□ 0.46
CXCL3-201ENST00000296026 A0A1B0GTL3 188 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 GOLGA6L10A6NI86 522 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 ERAL1O75616 437 aaKnown RBP17.92■□□□□ 0.46
CXCL3-201ENST00000296026 PPM1BO75688 479 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 BMP7P18075 431 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 FEN1P39748 380 aaKnown RBP17.92■□□□□ 0.46
CXCL3-201ENST00000296026 SERPINB9P50453 376 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 ZNF136P52737 540 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 MGAT2Q10469 447 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 MAP4K2Q12851 820 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 EXOSC7Q15024 291 aaKnown RBP17.92■□□□□ 0.46
CXCL3-201ENST00000296026 FBXL19-AS1Q494R0 122 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 FLYWCH1Q4VC44 716 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 EIPR1Q53HC9 387 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 NHSL2Q5HYW2 709 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 NSUN5P2Q63ZY6 315 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 TIGD3Q6B0B8 471 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 DESI1Q6ICB0 168 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 POMZP3Q6PJE2 187 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 MMP21Q8N119 569 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 OR1J4Q8NGS1 313 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 NINJ1Q92982 152 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 NTNG2Q96CW9 530 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 TRIB1Q96RU8 372 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 PAFAH2Q99487 392 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 UGT2B28Q9BY64 529 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 CDC42EP4Q9H3Q1 356 aaKnown RBP17.92■□□□□ 0.46
CXCL3-201ENST00000296026 METTL7AQ9H8H3 244 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 MAT2BQ9NZL9 334 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 CFL2Q9Y281 166 aa17.92■□□□□ 0.46
CXCL3-201ENST00000296026 FAM221AA4D161 298 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 PPP6CO00743 305 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 CDH16O75309 829 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 OTCP00480 354 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 PDYNP01213 254 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 ATP1B1P05026 303 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 RPS17P08708 135 aaKnown RBP17.91■□□□□ 0.46
CXCL3-201ENST00000296026 COL6A2P12110 1019 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 NAGAP17050 411 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 CSNK2A2P19784 350 aaPredicted RBP17.91■□□□□ 0.46
CXCL3-201ENST00000296026 PTPN6P29350 595 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 GALNT1Q10472 559 aaPredicted RBP17.91■□□□□ 0.46
CXCL3-201ENST00000296026 DCST1Q5T197 706 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 LETMD1Q6P1Q0 360 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 ANGPTL8Q6UXH0 198 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 TAOK1Q7L7X3 1001 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 SELENOMQ8WWX9 145 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 ABTB1Q969K4 478 aaPredicted RBP17.91■□□□□ 0.46
CXCL3-201ENST00000296026 TM4SF18Q96CE8 201 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 WDYHV1Q96HA8 205 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 FOXC2Q99958 501 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 MRPL57Q9BQC6 102 aaKnown RBP17.91■□□□□ 0.46
CXCL3-201ENST00000296026 ITPAQ9BY32 194 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 EPB41L4BQ9H329 900 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 ST6GALNAC2Q9UJ37 374 aa17.91■□□□□ 0.46
CXCL3-201ENST00000296026 FOXD3Q9UJU5 478 aaPredicted RBP17.91■□□□□ 0.46
CXCL3-201ENST00000296026 KIAA1549Q9HCM3 1950 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 CD8B2A6NJW9 211 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 A6NNC1 897 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 KRT38O76015 456 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 TSPAN8P19075 237 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 NAGLUP54802 743 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 CDH13P55290 713 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 FAM219BQ5XKK7 198 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 NUP54Q7Z3B4 507 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 YRDCQ86U90 279 aaKnown RBP17.9■□□□□ 0.46
CXCL3-201ENST00000296026 SIMC1Q8NDZ2 872 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 FAM83FQ8NEG4 500 aaPredicted RBP17.9■□□□□ 0.46
CXCL3-201ENST00000296026 ADCY4Q8NFM4 1077 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 ZNF483Q8TF39 744 aaPredicted RBP17.9■□□□□ 0.46
CXCL3-201ENST00000296026 FAM222BQ8WU58 562 aa17.9■□□□□ 0.46
CXCL3-201ENST00000296026 HGDQ93099 445 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms