RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 FUNDC2Q9BWH2 189 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 DCAF13Q9NV06 445 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 FXYD6-FXYD2A0A087WZ82 144 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 A0A1W2PPL8 197 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 ZBTB42B2RXF5 422 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 PRAMEF2O60811 474 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 OR2B3O76000 313 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 SYNGR4O95473 234 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 HBQ1P09105 142 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 GMPRP36959 345 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 EIF1AXP47813 144 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 GJA8P48165 433 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 SLC9A3P48764 834 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 CRYZQ08257 329 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 DNASE1L3Q13609 305 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 PAGE3Q5JUK9 113 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 OR51A7Q8NH64 312 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 MS4A4AQ96JQ5 239 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 ZFYVE21Q9BQ24 234 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 PINK1Q9BXM7 581 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 FXYD6Q9H0Q3 95 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 RTCAO00442 366 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 CLEC3AO75596 197 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 CYP17A1P05093 508 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 HNRNPA2B1P22626 353 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 RPL6Q02878 288 aaKnown RBP12.17□□□□□ -0.46
PTCD1-201ENST00000292478 SERTAD2Q14140 314 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 ZMYND11Q15326 602 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 GPR26Q8NDV2 337 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 OR4K5Q8NGD3 323 aa12.17□□□□□ -0.46
PTCD1-201ENST00000292478 PET100P0DJ07 73 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 PRKCAP17252 672 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 VAMP1P23763 118 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 GJA5P36382 358 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 MTNR1AP48039 350 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 LRP8Q14114 963 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 TSC22D1Q15714 1073 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 HNRNPA1L2Q32P51 320 aaKnown RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 DTWD1Q8N5C7 304 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 SLC5A8Q8N695 610 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 ARRDC2Q8TBH0 407 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 ELP5Q8TE02 316 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 MR1Q95460 341 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 SLC41A3Q96GZ6 507 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 SH2B3Q9UQQ2 575 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 GPR45Q9Y5Y3 372 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 NPIPA2E9PIF3 369 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 NPIPA3F8WFD2 350 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 AK4P27144 223 aaPredicted RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 DCTP40126 519 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 VIPR2P41587 438 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 TM4SF4P48230 202 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 MS4A2Q01362 244 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 PLP2Q04941 152 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 CDRT4Q8N9R6 151 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 TGM7Q96PF1 710 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 RANBP3Q9H6Z4 567 aaPredicted RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 TEX13DA0A0J9YY54 714 aaPredicted RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 LSM1O15116 133 aaKnown RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 SEMA4FO95754 770 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 DRD1P21728 446 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 GRK5P34947 590 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 HERV-K104P61576 105 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 ELOAQ14241 798 aaKnown RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 VTCN1Q7Z7D3 282 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 ZSCAN4Q8NAM6 433 aaPredicted RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 PAPD5Q8NDF8 572 aaKnown RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 C3orf58Q8NDZ4 430 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 OR2T4Q8NH00 348 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 KIAA1143Q96AT1 154 aaPredicted RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 PCDHA9Q9Y5H5 950 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 GCAP28676 217 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 RPS26P62854 115 aaKnown RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 PIGFQ07326 219 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 CBFBQ13951 182 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 KIR2DS3Q14952 304 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 LHFPL3Q86UP9 236 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 OR13J1Q8NGT2 312 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 DTD2Q96FN9 168 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 SLC39A13Q96H72 371 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 AIFM2Q9BRQ8 373 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 PREBQ9HCU5 417 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 MFSD13AQ14CX5 517 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 MAMDC2Q7Z304 686 aaPredicted RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 NAGSQ8N159 534 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 TMEM130Q8N3G9 435 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 Q8N402 240 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 PHOSPHO2Q8TCD6 241 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 INPP5KQ9BT40 448 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 URM1Q9BTM9 101 aaKnown RBP12.16□□□□□ -0.46
PTCD1-201ENST00000292478 NANSQ9NR45 359 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 ANKMY1Q9P2S6 941 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 PADI2Q9Y2J8 665 aa12.16□□□□□ -0.46
PTCD1-201ENST00000292478 AURKAO14965 403 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 ATP6V1G1O75348 118 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 SDC1P18827 310 aa12.15□□□□□ -0.46
PTCD1-201ENST00000292478 RIDAP52758 137 aaKnown RBP12.15□□□□□ -0.46
PTCD1-201ENST00000292478 SLC25A25Q6KCM7 469 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms