RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.91■■□□□ 1.585e-9■■□□□ 12.3
SSU72-201ENST00000291386 PRODH2Q9UF12 536 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 PCDHGA10Q9Y5H3 936 aa24.91■■□□□ 1.58
SSU72-201ENST00000291386 EDF1O60869 148 aaKnown RBP24.9■■□□□ 1.58
SSU72-201ENST00000291386 NEURL1O76050 574 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 LAMP1P11279 417 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 GPX3P22352 226 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 EXOSC7Q15024 291 aaKnown RBP24.9■■□□□ 1.58
SSU72-201ENST00000291386 OR1C1Q15619 314 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 TMEM156Q8N614 296 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 OR7G2Q8NG99 324 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 OR52R1Q8NGF1 315 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 STON2Q8WXE9 905 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 LRFN1Q9P244 771 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 BCAP29Q9UHQ4 241 aa24.9■■□□□ 1.58
SSU72-201ENST00000291386 NADKO95544 446 aaPredicted RBP24.89■■□□□ 1.58
SSU72-201ENST00000291386 EMDP50402 254 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 ZNF227Q86WZ6 799 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 OR2L13Q8N349 312 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 SIMC1Q8NDZ2 872 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 SLC22A8Q8TCC7 542 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 TESCQ96BS2 214 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 ELP4Q96EB1 424 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 SCMH1Q96GD3 660 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 SIGLEC12Q96PQ1 595 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 OR52B2Q96RD2 323 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 DPY30Q9C005 99 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 BHLHE41Q9C0J9 482 aaPredicted RBP24.89■■□□□ 1.58
SSU72-201ENST00000291386 CCDC134Q9H6E4 229 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 ANKRD10Q9NXR5 420 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 C19orf53Q9UNZ5 99 aaPredicted RBP24.89■■□□□ 1.58
SSU72-201ENST00000291386 GPR45Q9Y5Y3 372 aa24.89■■□□□ 1.58
SSU72-201ENST00000291386 TCP11X1B4DZS4 312 aa24.88■■□□□ 1.57
SSU72-201ENST00000291386 ZNF354AO60765 605 aaPredicted RBP24.88■■□□□ 1.57
SSU72-201ENST00000291386 DIAPH2O60879 1101 aa24.88■■□□□ 1.57
SSU72-201ENST00000291386 MANFP55145 182 aaKnown RBP24.88■■□□□ 1.57
SSU72-201ENST00000291386 DCAF7P61962 342 aa24.88■■□□□ 1.57
SSU72-201ENST00000291386 OC90Q02509 493 aaPredicted RBP24.88■■□□□ 1.57
SSU72-201ENST00000291386 LSM12Q3MHD2 195 aaKnown RBP24.88■■□□□ 1.57
SSU72-201ENST00000291386 HLA-DQA1Q5Y7H0 255 aa24.88■■□□□ 1.57
SSU72-201ENST00000291386 SPINK14Q6IE38 97 aa24.88■■□□□ 1.57
SSU72-201ENST00000291386 OPN5Q6U736 354 aa24.88■■□□□ 1.57
SSU72-201ENST00000291386 ZNF551Q7Z340 670 aaPredicted RBP24.88■■□□□ 1.57
SSU72-201ENST00000291386 ASB15Q8WXK1 588 aa24.88■■□□□ 1.57
SSU72-201ENST00000291386 GAL3ST4Q96RP7 486 aa24.88■■□□□ 1.57
SSU72-201ENST00000291386 PSMG1O95456 288 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 IDO1P14902 403 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 SOX3P41225 446 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 IDH3AP50213 366 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 CLNS1AP54105 237 aaKnown RBP24.87■■□□□ 1.57
SSU72-201ENST00000291386 SRSF11Q05519 484 aaKnown RBP24.87■■□□□ 1.57
SSU72-201ENST00000291386 INAQ16352 499 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 GSTA3Q16772 222 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 ZNF766Q5HY98 468 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 NXNQ6DKJ4 435 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 TMEM107Q6UX40 140 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 LYPD8Q6UX82 237 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 ACAD11Q709F0 780 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 DND1Q8IYX4 353 aaKnown RBP24.87■■□□□ 1.57
SSU72-201ENST00000291386 OR8J2Q8NGG1 315 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 NUDT8Q8WV74 236 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 SIKE1Q9BRV8 207 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 CCDC28BQ9BUN5 200 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 DUSP26Q9BV47 211 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 NTMQ9P121 344 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 DTX4Q9Y2E6 619 aa24.87■■□□□ 1.57
SSU72-201ENST00000291386 A0A1W2PRB8 838 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 A8MVJ9 347 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 UPK1AO00322 258 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 COQ9O75208 318 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 OR6B1O95007 311 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 CD46P15529 392 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 MC3RP41968 323 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 ST13P50502 369 aaKnown RBP24.86■■□□□ 1.57
SSU72-201ENST00000291386 AQP5P55064 265 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 DPY19L1Q2PZI1 675 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 COLEC12Q5KU26 742 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 SLC25A25Q6KCM7 469 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 TAGAPQ8N103 731 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 CYP4Z2PQ8N1L4 340 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 PSMA8Q8TAA3 256 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 ITPAQ9BY32 194 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 EPN3Q9H201 632 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 CLMPQ9H6B4 373 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 ANKRA2Q9H9E1 313 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 TCF7L2Q9NQB0 619 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 HPF1Q9NWY4 346 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 TAS2R9Q9NYW1 312 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 LUZP4Q9P127 313 aa24.86■■□□□ 1.57
SSU72-201ENST00000291386 SP1P08047 785 aa24.85■■□□□ 1.57
SSU72-201ENST00000291386 DRD5P21918 477 aa24.85■■□□□ 1.57
SSU72-201ENST00000291386 PPICP45877 212 aa24.85■■□□□ 1.57
SSU72-201ENST00000291386 NR0B1P51843 470 aaKnown RBP24.85■■□□□ 1.57
SSU72-201ENST00000291386 HSPB3Q12988 150 aa24.85■■□□□ 1.57
SSU72-201ENST00000291386 PDCD4Q53EL6 469 aaKnown RBP24.85■■□□□ 1.57
SSU72-201ENST00000291386 TMEM178AQ8NBL3 297 aa24.85■■□□□ 1.57
SSU72-201ENST00000291386 OR5P2Q8WZ92 322 aa24.85■■□□□ 1.57
SSU72-201ENST00000291386 HSPBAP1Q96EW2 488 aa24.85■■□□□ 1.57
SSU72-201ENST00000291386 VSTM2LQ96N03 204 aa24.85■■□□□ 1.57
SSU72-201ENST00000291386 EBF4Q9BQW3 602 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms