RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 ITGA1P56199 1179 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 CBX3Q13185 183 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 NR1D2Q14995 579 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 TTLL10Q6ZVT0 673 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 OR4N4Q8N0Y3 316 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 GAL3ST3Q96A11 431 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 TP53INP1Q96A56 240 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 ARSGQ96EG1 525 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 DUS3LQ96G46 650 aaKnown RBP8.49□□□□□ -1.05
SEC16A-201ENST00000277537 BMFQ96LC9 184 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 AMBRA1Q9C0C7 1298 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 OR8D2Q9GZM6 311 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 NAA50Q9GZZ1 169 aaKnown RBP8.49□□□□□ -1.05
SEC16A-201ENST00000277537 TMEM27Q9HBJ8 222 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 RLIMQ9NVW2 624 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 ZNF624Q9P2J8 865 aaPredicted RBP8.49□□□□□ -1.05
SEC16A-201ENST00000277537 WBP11Q9Y2W2 641 aaKnown RBP8.49□□□□□ -1.05
SEC16A-201ENST00000277537 ANAPC1Q9H1A4 1944 aa8.49□□□□□ -1.05
SEC16A-201ENST00000277537 PROS1P07225 676 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 TCEA1P23193 301 aaKnown RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 EPHA2P29317 976 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 AHRP35869 848 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 YPEL5P62699 121 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 FAM111BQ6SJ93 734 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 SYNPOQ8N3V7 929 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 AVL9Q8NBF6 648 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 CHDHQ8NE62 594 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 HLA-CQ95604 372 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 DGAT2Q96PD7 388 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 SLC6A20Q9NP91 592 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 NDUFAF4Q9P032 175 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 ABCA7Q8IZY2 2146 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 AIREO43918 545 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 STSP08842 583 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 POU2F2P09086 479 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 PCSK6P29122 969 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 VBP1P61758 197 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 MAT1AQ00266 395 aaKnown RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 CHRNEQ04844 493 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 ST3GAL4Q11206 333 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 TIGD6Q17RP2 521 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 MICAQ29983 383 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 SLC35F1Q5T1Q4 408 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 HSDL2Q6YN16 418 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 RANBP3LQ86VV4 465 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 OR4K5Q8NGD3 323 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 PMEPA1Q969W9 287 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 PTCHD1Q96NR3 888 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 PHOX2BQ99453 314 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 PHF7Q9BWX1 381 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 LHPPQ9H008 270 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 NUAK2Q9H093 628 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 ZSCAN32Q9NX65 697 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 GPR83Q9NYM4 423 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 CLCA3PQ9Y6N3 262 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 C5orf42Q9H799 3197 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 CELA2BP08218 269 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 CNR2P34972 360 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 RPS3AP61247 264 aaKnown RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 MXD1Q05195 221 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 VRK2Q86Y07 508 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 MFSD9Q8NBP5 474 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 RAB2BQ8WUD1 216 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 CDS1Q92903 461 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 TMEM203Q969S6 136 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 OR51V1Q9H2C8 321 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 MARCH7Q9H992 704 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 DCNP07585 359 aaKnown RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 CKMT1AP12532 417 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 SOX6P35712 828 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 GINS1Q14691 196 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 C1orf189Q5VU69 101 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 TSPYL5Q86VY4 417 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 ERI1Q8IV48 349 aaKnown RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 GALNT12Q8IXK2 581 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 PAPD5Q8NDF8 572 aaKnown RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 DENND6BQ8NEG7 585 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 BBS10Q8TAM1 723 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 SUN3Q8TAQ9 357 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 PIK3R3Q92569 461 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 DACT3Q96B18 629 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 TBX5Q99593 518 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 NIPSNAP1Q9BPW8 284 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 NPLQ9BXD5 320 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 TUBA8Q9NY65 449 aaPredicted RBP8.48□□□□□ -1.05
SEC16A-201ENST00000277537 AP1M2Q9Y6Q5 423 aa8.48□□□□□ -1.05
SEC16A-201ENST00000277537 KIR2DS5A0A0G2JLQ3 304 aa8.47□□□□□ -1.05
SEC16A-201ENST00000277537 A0A0G2JNG1 304 aa8.47□□□□□ -1.05
SEC16A-201ENST00000277537 A0A0J9YY10 115 aa8.47□□□□□ -1.05
SEC16A-201ENST00000277537 KIR2DS3K7RE56 304 aa8.47□□□□□ -1.05
SEC16A-201ENST00000277537 KLHL18O94889 574 aa8.47□□□□□ -1.05
SEC16A-201ENST00000277537 GKN3PP0CG01 181 aa8.47□□□□□ -1.05
SEC16A-201ENST00000277537 CRHBPP24387 322 aa8.47□□□□□ -1.05
SEC16A-201ENST00000277537 C21orf33P30042 268 aaPredicted RBP8.47□□□□□ -1.05
SEC16A-201ENST00000277537 GPR4P46093 362 aa8.47□□□□□ -1.05
SEC16A-201ENST00000277537 ARRB1P49407 418 aaPredicted RBP8.47□□□□□ -1.05
SEC16A-201ENST00000277537 VASPP50552 380 aaPredicted RBP8.47□□□□□ -1.05
SEC16A-201ENST00000277537 HNRNPKP61978 463 aaKnown RBP eCLIP8.47□□□□□ -1.055e-6■■■■□ 19.6
SEC16A-201ENST00000277537 ST3GAL3Q11203 375 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms