RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 ZFP90Q8TF47 636 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 AMBRA1Q9C0C7 1298 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 ZBTB20Q9HC78 741 aaPredicted RBP13.59□□□□□ -0.23
TMEM47-201ENST00000275954 TAS2R16Q9NYV7 291 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 PHF11Q9UIL8 331 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 PLEKHM1Q9Y4G2 1056 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 PMF1-BGLAPU3KQ54 211 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 RTTNQ86VV8 2226 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 NPIPA5A0A0B4J1W7 369 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 IQCMA0A1B0GVH7 501 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 NPIPA7E9PJI5 369 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 SLCO2B1O94956 709 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 RPP14O95059 124 aaKnown RBP13.59□□□□□ -0.23
TMEM47-201ENST00000275954 ETHE1O95571 254 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 NPIPA8P0DM63 369 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 DDCP20711 480 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 CSNK1EP49674 416 aaKnown RBP13.59□□□□□ -0.23
TMEM47-201ENST00000275954 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 SLC25A36Q96CQ1 311 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 FAM46AQ96IP4 442 aaKnown RBP13.59□□□□□ -0.23
TMEM47-201ENST00000275954 SECISBP2Q96T21 854 aaKnown RBP13.59□□□□□ -0.23
TMEM47-201ENST00000275954 HDHD5Q9BXW7 423 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 STARD5Q9NSY2 213 aa13.59□□□□□ -0.23
TMEM47-201ENST00000275954 C1orf226A1L170 272 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 ASPDHA6ND91 283 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 MCIDASD6RGH6 385 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 TMX2-CTNND1H3BSU7 103 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 KHNYNO15037 678 aaKnown RBP13.58□□□□□ -0.24
TMEM47-201ENST00000275954 ODF4Q2M2E3 257 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 INSM2Q96T92 566 aaPredicted RBP13.58□□□□□ -0.24
TMEM47-201ENST00000275954 PRR14Q9BWN1 585 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 MND1Q9BWT6 205 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 PLA2G2FQ9BZM2 168 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 OR8D2Q9GZM6 311 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 EMC8O43402 210 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 SSNA1O43805 119 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 PCDHGA12O60330 932 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 GCGRP47871 477 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
TMEM47-201ENST00000275954 TUBA1BP68363 451 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 MESP2Q0VG99 397 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 IRF4Q15306 451 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 ZNF691Q5VV52 312 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 TUBA1AQ71U36 451 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 PAPD5Q8NDF8 572 aaKnown RBP13.58□□□□□ -0.24
TMEM47-201ENST00000275954 OR8J2Q8NGG1 315 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 KLHDC7BQ96G42 594 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 TRNT1Q96Q11 434 aaKnown RBP13.58□□□□□ -0.24
TMEM47-201ENST00000275954 CLCA3PQ9Y6N3 262 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 BRCA1P38398 1863 aaKnown RBP13.58□□□□□ -0.24
TMEM47-201ENST00000275954 BLOC1S5-TXNDC5H3BN57 136 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 FAAHO00519 579 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 KLK8O60259 260 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 SOX30O94993 753 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 PSKH1P11801 424 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 CA5AP35218 305 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 SHC2P98077 582 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 ZNF750Q32MQ0 723 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 EIPR1Q53HC9 387 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 HENMT1Q5T8I9 393 aaKnown RBP13.58□□□□□ -0.24
TMEM47-201ENST00000275954 FRMPD2BQ6IN97 320 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 OR51L1Q8NGJ5 315 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 SLC30A2Q9BRI3 323 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 C1QTNF3Q9BXJ4 246 aa13.58□□□□□ -0.24
TMEM47-201ENST00000275954 EPHA2P29317 976 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 SOX3P41225 446 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 BLKP51451 505 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 OR2B6P58173 313 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 EIF2B5Q13144 721 aaKnown RBP13.57□□□□□ -0.24
TMEM47-201ENST00000275954 TDGQ13569 410 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 CCNJQ5T5M9 372 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 JAZF1Q86VZ6 243 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 NRMQ8IXM6 262 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 KLHL36Q8N4N3 616 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 B3GNT7Q8NFL0 401 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 OR5M3Q8NGP4 307 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 C5orf34Q96MH7 638 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 PRSS16Q9NQE7 514 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 ZNF221Q9UK13 617 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 MED31Q9Y3C7 131 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 ACSL1P33121 698 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 BMP8BP34820 402 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 Q6ZNB5 142 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 BMP8AQ7Z5Y6 402 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 MCCC1Q96RQ3 725 aaPredicted RBP13.57□□□□□ -0.24
TMEM47-201ENST00000275954 GSDMCQ9BYG8 508 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 CXorf36Q9H7Y0 433 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 MUTYHQ9UIF7 546 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 MBD1Q9UIS9 605 aaPredicted RBP13.57□□□□□ -0.24
TMEM47-201ENST00000275954 PCDHGA2Q9Y5H1 932 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 OR51B4Q9Y5P0 310 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 GRK6P43250 576 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 BCAP31P51572 246 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 GABARAPL2P60520 117 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 TIAL1Q01085 375 aaKnown RBP eCLIP13.57□□□□□ -0.24
TMEM47-201ENST00000275954 NDUFAF6Q330K2 333 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 GGTA1PQ4G0N0 100 aa13.57□□□□□ -0.24
TMEM47-201ENST00000275954 ZNF544Q6NX49 715 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms