RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 ACSM1Q08AH1 577 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 TRA2AQ13595 282 aaKnown RBP eCLIP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 TSNQ15631 228 aaKnown RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ZNF79Q15937 498 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 RFTN2Q52LD8 501 aaPredicted RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ATAD3CQ5T2N8 411 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 LYPLAL1Q5VWZ2 237 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MEDAGQ5VYS4 303 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 LHX8Q68G74 356 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MDGA1Q8NFP4 955 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 GRPEL2Q8TAA5 225 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 NETO1Q8TDF5 533 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 FAM149B1Q96BN6 582 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 WDR34Q96EX3 536 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CMTM7Q96FZ5 175 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 SRRQ9GZT4 340 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 TMEM38AQ9H6F2 299 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 BARX1Q9HBU1 254 aaPredicted RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 SLC6A13Q9NSD5 602 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ELOVL2Q9NXB9 296 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 P4HTMQ9NXG6 502 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MRPL39Q9NYK5 338 aaKnown RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ZNF226Q9NYT6 803 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 RNF6Q9Y252 685 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 LOC105369274A0A096LPK9 316 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 LOC102723532A0A0G2JNH3 316 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 LOC105371267A0A1B0GV96 52 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 BET1O15155 118 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 RGS14O43566 566 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 KDELR3O43731 214 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MPZL2O60487 215 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 VPS26AO75436 327 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 PTBP3O95758 552 aaKnown RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 GLB1P16278 677 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 GAS1P54826 345 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 NCS1P62166 190 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 DSC1Q08554 894 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 NPRL3Q12980 569 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ABRAXAS2Q15018 415 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MICAQ29983 383 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 C19orf54Q5BKX5 351 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 PRSS36Q5K4E3 855 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 GPRC6AQ5T6X5 926 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ARHGAP40Q5TG30 622 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 METAP1DQ6UB28 335 aaPredicted RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 TRILQ7L0X0 811 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 LRRC70Q7Z2Q7 622 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 STK32CQ86UX6 486 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 FAM185AQ8N0U4 392 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 OR4N4Q8N0Y3 316 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CLDN22Q8N7P3 220 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 NETO2Q8NC67 525 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ZNF485Q8NCK3 441 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 OR4F6Q8NGB9 312 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 OR10T2Q8NGX3 314 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MAFAQ8NHW3 353 aaPredicted RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 EDARADDQ8WWZ3 215 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 DNASE1L2Q92874 299 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 COQ8BQ96D53 544 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 FAM46AQ96IP4 442 aaKnown RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 GAD1Q99259 594 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 SLC46A2Q9BY10 475 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 NDUFB11Q9NX14 153 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 SCN3BQ9NY72 215 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CFAP97Q9P2B7 532 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 LIPT1Q9Y234 373 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CFL2Q9Y281 166 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MRPS17Q9Y2R5 130 aaKnown RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ZAR1LA6NP61 321 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 NOTOA8MTQ0 251 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 J3KR12 359 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CDC7O00311 574 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 SEC24AO95486 1093 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 HMGA1P17096 107 aaKnown RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 RGS6P49758 472 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 HTR6P50406 440 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 PLK1P53350 603 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 AP2S1P53680 142 aaPredicted RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MFAP4P55083 255 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CASP9P55211 416 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 MTPNP58546 118 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CSTF3Q12996 717 aaKnown RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 SP140Q13342 867 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 GTF2H2Q13888 395 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 PDE7AQ13946 482 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ZNF658BQ4V348 819 aaPredicted RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 GTF2H2CQ6P1K8 395 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 LAYNQ6UX15 382 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 TCAIMQ8N3R3 496 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 AMER2Q8N7J2 671 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 OR52K2Q8NGK3 314 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CNIH3Q8TBE1 160 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ZFAND1Q8TCF1 268 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 SAT2Q96F10 170 aaPredicted RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 ITCHQ96J02 903 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 CELF6Q96J87 481 aaKnown RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 NMUR1Q9HB89 426 aa5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 SIRT3Q9NTG7 399 aaPredicted RBP5.8□□□□□ -1.48
CDKAL1-201ENST00000274695 FAM120CQ9NX05 1096 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms