RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ZNF765Q7L2R6 523 aa14.64□□□□□ -0.07
TIMP3-201ENST00000266085 P4HA3Q7Z4N8 544 aa14.64□□□□□ -0.07
TIMP3-201ENST00000266085 LKAAEAR1Q8TD35 194 aa14.64□□□□□ -0.07
TIMP3-201ENST00000266085 EZH1Q92800 747 aaPredicted RBP14.64□□□□□ -0.07
TIMP3-201ENST00000266085 WBP2Q969T9 261 aa14.64□□□□□ -0.07
TIMP3-201ENST00000266085 SLC22A4Q9H015 551 aa14.64□□□□□ -0.07
TIMP3-201ENST00000266085 PIGUQ9H490 435 aa14.64□□□□□ -0.07
TIMP3-201ENST00000266085 THSD7AQ9UPZ6 1657 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 B4GALT3O60512 393 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 CLEC3AO75596 197 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 APOL3O95236 402 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 PVRP15151 417 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF182P17025 639 aaPredicted RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 NDUFV2P19404 249 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 PSMB5P28074 263 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 MMP12P39900 470 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 CRYZQ08257 329 aaKnown RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 LRIT3Q3SXY7 679 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 PTCRAQ6ISU1 281 aaPredicted RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 FBXO42Q6P3S6 717 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 PLEKHG7Q6ZR37 379 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 GPAT4Q86UL3 456 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 ACOT4Q8N9L9 421 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 OR6N2Q8NGY6 317 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 THRSPQ92748 146 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 B3GAT2Q9NPZ5 323 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 TMEM181Q9P2C4 612 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 CPNE7Q9UBL6 633 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 EPHA6Q9UF33 1036 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 DKKL1Q9UK85 242 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 N4BP2Q86UW6 1770 aaPredicted RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 ECM29Q5VYK3 1845 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 WRBO00258 174 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 RNASET2O00584 256 aaKnown RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 MAPK3P27361 379 aaPredicted RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 RPL34P49207 117 aaKnown RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 CLEC14AQ86T13 490 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 TMEFF1Q8IYR6 380 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 OR5L2Q8NGL0 311 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 SLC30A3Q99726 388 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 ASCC3Q8N3C0 2202 aaKnown RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 UNC119BA6NIH7 251 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 DENRO43583 198 aaKnown RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 RORAP35398 523 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 TDGQ13569 410 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 WSCD2Q2TBF2 565 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 ASB18Q6ZVZ8 466 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF627Q7L945 461 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 HAVCR1Q96D42 359 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 LRR1Q96L50 414 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 SERINC2Q96SA4 455 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 C20orf27Q9GZN8 174 aa14.63□□□□□ -0.07
TIMP3-201ENST00000266085 PITHD1Q9GZP4 211 aaPredicted RBP14.63□□□□□ -0.07
TIMP3-201ENST00000266085 MT-ND2P03891 347 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 ZDHHC11BP0C7U3 371 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 ADORA3P0DMS8 318 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 PGCP20142 388 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 CTHP32929 405 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 NUDT1P36639 197 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 ODF4Q2M2E3 257 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 CYP4V2Q6ZWL3 525 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 TSPYL5Q86VY4 417 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 RNF175Q8N4F7 328 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 MGLLQ99685 303 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 WBP1LQ9NX94 342 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 THAP10Q9P2Z0 257 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 GRIP1Q9Y3R0 1128 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 PCDHGB5Q9Y5G0 923 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 A0A0A6YYC8 382 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 I3L1I5 382 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 POLR1CO15160 346 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF888P0CJ79 500 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 PRDX1Q06830 199 aaKnown RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 CHAF1BQ13112 559 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 GBX1Q14549 363 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 FAM189A2Q15884 450 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 MOGQ16653 247 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 KLHL26Q53HC5 615 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 PARM1Q6UWI2 310 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF440Q8IYI8 595 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 CIDECQ96AQ7 238 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 SGTBQ96EQ0 304 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 NANSQ9NR45 359 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 CDH10Q9Y6N8 788 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 C17orf113A0A1B0GUU1 675 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 GXYLT2A0PJZ3 443 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 METTL21EPA6NDL7 271 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 EIF1AYO14602 144 aaKnown RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 MRPL3P09001 348 aaKnown RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 DCTP40126 519 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 PDX1P52945 283 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 TMBIM6P55061 237 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 DCDC1P59894 354 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 RAB39AQ14964 217 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 KCTD18Q6PI47 426 aaPredicted RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 GPALPP1Q8IXQ4 340 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 CDRT4Q8N9R6 151 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 ISOC1Q96CN7 298 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 INSM2Q96T92 566 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms