RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GPR62Q9BZJ7 368 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 DERL2Q9GZP9 239 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 NMUR1Q9HB89 426 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 NT5MQ9NPB1 228 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 EXOSC3Q9NQT5 275 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 CA10Q9NS85 328 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 TMEM5Q9Y2B1 443 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SF3B6Q9Y3B4 125 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 AIPO00170 330 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 GPR31O00270 319 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 ST8SIA5O15466 376 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 KLK8O60259 260 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 IGF2P01344 180 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 GASTP01350 101 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 URODP06132 367 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 IRF1P10914 325 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 LHX1P48742 406 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 PGFP49763 221 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 MVDP53602 400 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 MAZP56270 477 aaKnown RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 BCL2L1Q07817 233 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 PLD1Q13393 1074 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 PUM1Q14671 1186 aaKnown RBP eCLIP8.31□□□□□ -1.084e-7■□□□□ 9.7
VAPB-201ENST00000265619 C21orf62-AS1Q17RA5 79 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 METTL11BQ5VVY1 283 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 LYPD4Q6UWN0 246 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 USP30Q70CQ3 517 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 GPR135Q8IZ08 494 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 CHST14Q8NCH0 376 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 GATAD2BQ8WXI9 593 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 TREX2Q9BQ50 279 aaPredicted RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 ELOVL2Q9NXB9 296 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 FTSJ1Q9UET6 329 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 GLS2Q9UI32 602 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 SESN1Q9Y6P5 492 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 OR6C75A6NL08 312 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 H7C2Y5 167 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 CASKO14936 926 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 GUCA1CO95843 209 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 RECKO95980 971 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 IL6P05231 212 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 KLK3P07288 261 aaPredicted RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 PSMA3P25788 255 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 HSD17B2P37059 387 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 OPRD1P41143 372 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 HSPA7P48741 367 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 FGL1Q08830 312 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 EFEMP1Q12805 493 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 ZNF124Q15973 351 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 ZSWIM7Q19AV6 140 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 GSG1Q2KHT4 349 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 C3orf38Q5JPI3 329 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 CD276Q5ZPR3 534 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 TOP6BLQ8N6T0 577 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 L3MBTL4Q8NA19 623 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 TEX47Q8TBZ9 253 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 ZDHHC1Q8WTX9 485 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 SFT2D1Q8WV19 159 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 OTUB1Q96FW1 271 aaPredicted RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 SMARCD1Q96GM5 515 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 THAP7Q9BT49 309 aaPredicted RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 C1QTNF3Q9BXJ4 246 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 NKX6-2Q9C056 277 aaPredicted RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 NIT2Q9NQR4 276 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 EXTL2Q9UBQ6 330 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 LOC285095A0A1B0GVY8 99 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 CLIC1O00299 241 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 AKR7A3O95154 331 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 F12P00748 615 aaPredicted RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 TCRBP04435 133 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 HIST1H2AGP0C0S8 130 aaPredicted RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 HIST1H2ADP20671 130 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 PPP3R1P63098 170 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 IL10RBQ08334 325 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 TCTN1Q2MV58 587 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 HIST2H2AA3Q6FI13 130 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 TAS1R1Q7RTX1 841 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 IQCF1Q8N6M8 205 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 ADAMTS14Q8WXS8 1223 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 HIST1H2AHQ96KK5 128 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 KCTD7Q96MP8 289 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 HIST1H2AJQ99878 128 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 KCNH6Q9H252 994 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 IPPKQ9H8X2 491 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 ATP13A1Q9HD20 1204 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 IMP3Q9NV31 184 aaKnown RBP8.31□□□□□ -1.08
VAPB-201ENST00000265619 NKIRAS2Q9NYR9 191 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 BTNL2Q9UIR0 455 aa8.31□□□□□ -1.08
VAPB-201ENST00000265619 PQLC2LA1A4F0 135 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 HEPACAM2A8MVW5 462 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 IFRD1O00458 451 aaPredicted RBP8.3□□□□□ -1.08
VAPB-201ENST00000265619 RFXANKO14593 260 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 MATN3O15232 486 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 PSMD3O43242 534 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SSNA1O43805 119 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 PIP5K1CO60331 668 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 SEMA7AO75326 666 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 IL33O95760 270 aa8.3□□□□□ -1.08
VAPB-201ENST00000265619 ECDO95905 644 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms