RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SULT1A4P0DMN0 295 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 BTCP35070 178 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 ETV5P41161 510 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 RPIAP49247 311 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 FABP5Q01469 135 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 FAM151BQ6UXP7 276 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 C3P1Q6ZMU1 363 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 TMEM91Q6ZNR0 172 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 ANKRD33Q7Z3H0 272 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 BCDIN3DQ7Z5W3 292 aaKnown RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 SYT12Q8IV01 421 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 OR5T2Q8NGG2 359 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 LKAAEAR1Q8TD35 194 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 YIPF5Q969M3 257 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 RFT1Q96AA3 541 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 ARMC5Q96C12 935 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 SLC6A18Q96N87 628 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 THAP7Q9BT49 309 aaPredicted RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 SORBS1Q9BX66 1292 aaKnown RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 TTYH1Q9H313 450 aaPredicted RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 RC3H2Q9HBD1 1191 aaKnown RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 ARL15Q9NXU5 204 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 EXTL2Q9UBQ6 330 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 BTNL2Q9UIR0 455 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 CRLS1Q9UJA2 301 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 POMT2Q9UKY4 750 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 PCDHB9Q9Y5E1 797 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 NUBP2Q9Y5Y2 271 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 TTC3P53804 2025 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 GAPDHSO14556 408 aaPredicted RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 UGDHO60701 494 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 RAB36O95755 333 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 RHCEP18577 417 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 IRS1P35568 1242 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 MAPK8P45983 427 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 WNT3P56703 355 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 RPS24P62847 133 aaKnown RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 ARF5P84085 180 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 ZXDBP98169 803 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 GPR17Q13304 367 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 SP140Q13342 867 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 DSG2Q14126 1118 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 RNF219Q5W0B1 726 aaPredicted RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 UXS1Q8NBZ7 420 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 VPS37AQ8NEZ2 397 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 OR2T35Q8NGX2 323 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 ASB12Q8WXK4 309 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 OTULINQ96BN8 352 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 SFXN2Q96NB2 322 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 CHST8Q9H2A9 424 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 ZFYVE1Q9HBF4 777 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 THSD1Q9NS62 852 aa12.43□□□□□ -0.42
NUP54-201ENST00000264883 SF3B6Q9Y3B4 125 aaKnown RBP12.43□□□□□ -0.42
NUP54-201ENST00000264883 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 MTMR11A4FU01 709 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 PRAMEF25A6NGN4 478 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 SLC16A5O15375 505 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 SCN2BO60939 215 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 OR5F1O95221 314 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 TGM6O95932 706 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 LPLP06858 475 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 COX7A2P14406 83 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 EPORP19235 508 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 C4BPBP20851 252 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 OR1G1P47890 313 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 RHOAP61586 193 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 COX10Q12887 443 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 GANABQ14697 944 aaKnown RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 MPPE1Q53F39 396 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 FAM209BQ5JX69 171 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 ANXA8L1Q5VT79 327 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 FRG2Q64ET8 278 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 ATRAIDQ6UW56 229 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 CASP12Q6UXS9 341 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 WASH2PQ6VEQ5 465 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 TTC9BQ8N6N2 239 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 C11orf65Q8NCR3 313 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 DBF4BQ8NFT6 615 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 OR52I1Q8NGK6 324 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 APOLD1Q96LR9 279 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 FRG2BQ96QU4 278 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 SEPT5Q99719 369 aaPredicted RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 PIP5K1AQ99755 562 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 TCF25Q9BQ70 676 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 BOCQ9BWV1 1114 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 ZCCHC4Q9H5U6 513 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 NMNAT1Q9HAN9 279 aaPredicted RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 TMEM161AQ9NX61 479 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 COPZ2Q9P299 210 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 ZNF624Q9P2J8 865 aaPredicted RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 CYB5R1Q9UHQ9 305 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 PCDHGA9Q9Y5G4 932 aaKnown RBP12.42□□□□□ -0.42
NUP54-201ENST00000264883 PRSS21Q9Y6M0 314 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 TCRBV16S1A1N1A0A5B0 115 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 GABRR3A8MPY1 467 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 PDCD5O14737 125 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 SSNA1O43805 119 aa12.42□□□□□ -0.42
NUP54-201ENST00000264883 PQBP1O60828 265 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms