RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 B3GAT2Q9NPZ5 323 aa13.3□□□□□ -0.28
CDH3-201ENST00000264012 SH3PXD2BA1X283 911 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 GPR89AB7ZAQ6 455 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 PRAMEF26H0Y7S4 382 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 GATBO75879 557 aaKnown RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 C1orf105O95561 183 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 CSN2P05814 226 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 GPR89BP0CG08 455 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 NAA10P41227 235 aaPredicted RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 SOX9P48436 509 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 SELENOWP63302 87 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 CDKL1Q00532 357 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 CPZQ66K79 652 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 RASGEF1AQ8N9B8 481 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 OR52E1Q8NGJ3 308 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 PROKR1Q8TCW9 393 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 DNAJA4Q8WW22 397 aaPredicted RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 GATA6Q92908 595 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 EGLN2Q96KS0 407 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 A0A0X1KG70 313 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 ABLIM3O94929 683 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 SCRN3Q0VDG4 424 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 C1orf189Q5VU69 101 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 ALG1LQ6GMV1 187 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 TMEM225Q6GV28 225 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 C7orf57Q8NEG2 295 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 NEIL3Q8TAT5 605 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 LGALS12Q96DT0 336 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 DNAJA3Q96EY1 480 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 SERINC2Q96SA4 455 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 ZBP1Q9H171 429 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 METTL21EPA6NDL7 271 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 ANTXRLA6NF34 631 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 GABRR3A8MPY1 467 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 ALDOCP09972 364 aaKnown RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 AK4P27144 223 aaPredicted RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 GABARAPL2P60520 117 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 CENPSQ8N2Z9 138 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 MFSD2AQ8NA29 543 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 LMAN1LQ9HAT1 526 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 DCAF13Q9NV06 445 aaKnown RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 PAK1IP1Q9NWT1 392 aaPredicted RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 ACTR10Q9NZ32 417 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 E2F3O00716 465 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 SPARCP09486 303 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 ADORA3P0DMS8 318 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 PCGF2P35227 344 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 SOX2P48431 317 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 NSDHLQ15738 373 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 ZNF227Q86WZ6 799 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 CITED4Q96RK1 184 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 WACQ9BTA9 647 aa13.29□□□□□ -0.28
CDH3-201ENST00000264012 TTYH1Q9H313 450 aaPredicted RBP13.29□□□□□ -0.28
CDH3-201ENST00000264012 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.28□□□□□ -0.28
CDH3-201ENST00000264012 GXYLT2A0PJZ3 443 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 DLGAP1O14490 977 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 IGFBP6P24592 240 aaPredicted RBP13.28□□□□□ -0.28
CDH3-201ENST00000264012 MC3RP41968 323 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ACTC1P68032 377 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ACTA1P68133 377 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 KIR2DS3Q14952 304 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 C4orf46Q504U0 113 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 P4HA3Q7Z4N8 544 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 SERPINA11Q86U17 422 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 SLC44A3Q8N4M1 653 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ACOT4Q8N9L9 421 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ANKRD60Q9BZ19 345 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ZBTB20Q9HC78 741 aaPredicted RBP13.28□□□□□ -0.28
CDH3-201ENST00000264012 MYNNQ9NPC7 610 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 AASSQ9UDR5 926 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 A0A1B0GVI7 797 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 PGCP20142 388 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 PYCR1P32322 319 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 RORAP35398 523 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ARHGDIBP52566 201 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 GBX1Q14549 363 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 LRRC26Q2I0M4 334 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 KLHL26Q53HC5 615 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 UBE2Q1Q7Z7E8 422 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 THRSPQ92748 146 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 STRADBQ9C0K7 418 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 TIGARQ9NQ88 270 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 RARRES3Q9UL19 164 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 SEMA3DO95025 777 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ZNF888P0CJ79 500 aaPredicted RBP13.28□□□□□ -0.28
CDH3-201ENST00000264012 ITGA3P26006 1051 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 CNR2P34972 360 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ZNF782Q6ZMW2 699 aaPredicted RBP13.28□□□□□ -0.28
CDH3-201ENST00000264012 ZNF517Q6ZMY9 492 aaPredicted RBP13.28□□□□□ -0.28
CDH3-201ENST00000264012 RFLNAQ6ZTI6 216 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 RASSF6Q6ZTQ3 369 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 NRMQ8IXM6 262 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 LSMEM2Q8N112 164 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 MS4A4EQ96PG1 132 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 MACROD1Q9BQ69 325 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 GPR83Q9NYM4 423 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 SLC22A31A6NKX4 558 aa13.28□□□□□ -0.28
CDH3-201ENST00000264012 ZNF208O43345 1280 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms