RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 OR51I1Q9H343 314 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 CXorf36Q9H7Y0 433 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 ADAM29Q9UKF5 820 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 ANHXE9PGG2 379 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 CRISP1P54107 249 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 NCS1P62166 190 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 TRA2BP62995 288 aaKnown RBP15.44■□□□□ 0.06
CTCF-201ENST00000264010 COX10Q12887 443 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 SMN1Q16637 294 aaKnown RBP15.44■□□□□ 0.06
CTCF-201ENST00000264010 RPS26P11Q5JNZ5 115 aaPredicted RBP15.44■□□□□ 0.06
CTCF-201ENST00000264010 DESI1Q6ICB0 168 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 ZNF547Q8IVP9 402 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 GJD3Q8N144 294 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 LINC00471Q8N535 108 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 FAM46DQ8NEK8 389 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 SPNS1Q9H2V7 528 aa15.44■□□□□ 0.06
CTCF-201ENST00000264010 FAAHO00519 579 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 TPST2O60704 377 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 PAPLNO95428 1278 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 CPN2P22792 545 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 FEN1P39748 380 aaKnown RBP15.43■□□□□ 0.06
CTCF-201ENST00000264010 BTN3A2P78410 334 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 ILF3Q12906 894 aaKnown RBP eCLIP15.43■□□□□ 0.061e-7■■□□□ 14.1
CTCF-201ENST00000264010 USP43Q70EL4 1123 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 GRAMD2AQ8IUY3 354 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 CCDC116Q8IYX3 515 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 BBS10Q8TAM1 723 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 TM4SF18Q96CE8 201 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 FZD3Q9NPG1 666 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 ERVK13-1Q9NX77 482 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 MS4A12Q9NXJ0 267 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 OR52A4PA6NMU1 304 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 ATP6V1G2-DDX39BF2Z307 99 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 CD247P20963 164 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 EIF2DP41214 584 aaKnown RBP15.43■□□□□ 0.06
CTCF-201ENST00000264010 EMP3P54852 163 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 ST3GAL4Q11206 333 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 OR8K5Q8NH50 307 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 MOAP1Q96BY2 351 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 CHFRQ96EP1 664 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 HRASLS5Q96KN8 279 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 CAPN10Q9HC96 672 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 ALPPP05187 535 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 C8orf89P0DMQ9 161 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 DGKEP52429 567 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 PCDH1Q08174 1060 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 HORMAD2Q8N7B1 307 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 GOT1L1Q8NHS2 421 aaPredicted RBP15.43■□□□□ 0.06
CTCF-201ENST00000264010 ZCCHC10Q8TBK6 192 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 APOOQ9BUR5 198 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 NT5DC2Q9H857 520 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 ACSS1Q9NUB1 689 aaPredicted RBP15.43■□□□□ 0.06
CTCF-201ENST00000264010 TVP23BQ9NYZ1 205 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 TAAR2Q9P1P5 351 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 NUP50Q9UKX7 468 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 NDRG4Q9ULP0 352 aaKnown RBP15.43■□□□□ 0.06
CTCF-201ENST00000264010 RNF6Q9Y252 685 aa15.43■□□□□ 0.06
CTCF-201ENST00000264010 C1orf226A1L170 272 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 CLCA1A8K7I4 914 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 KLF8O95600 359 aaPredicted RBP15.42■□□□□ 0.06
CTCF-201ENST00000264010 ASGR2P07307 311 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 PIP5KL1Q5T9C9 394 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 ZNF730Q6ZMV8 503 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 SGCDQ92629 289 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 RIT1Q92963 219 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 NEURL3Q96EH8 262 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 NEURL2Q9BR09 285 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 CTPS2Q9NRF8 586 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 RPL36Q9Y3U8 105 aaKnown RBP15.42■□□□□ 0.06
CTCF-201ENST00000264010 CENPBD1B2RD01 187 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 HAT1O14929 419 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 OR2B3O76000 313 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 ADAP00813 363 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 ALPPL2P10696 532 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 CTSEP14091 401 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 RFX3P48380 749 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 RGS8P57771 180 aaPredicted RBP15.42■□□□□ 0.06
CTCF-201ENST00000264010 RPS3AP61247 264 aaKnown RBP15.42■□□□□ 0.06
CTCF-201ENST00000264010 CRB2Q5IJ48 1285 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 TBC1D15Q8TC07 691 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 SLC9A6Q92581 669 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 ZNF566Q969W8 418 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 LGALS12Q96DT0 336 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 MBNL1Q9NR56 388 aaKnown RBP15.42■□□□□ 0.06
CTCF-201ENST00000264010 C1GALT1Q9NS00 363 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 THSD1Q9NS62 852 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 EMC3Q9P0I2 261 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 C5orf67F2Z3F1 127 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 WWP2O00308 870 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 YY2O15391 372 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 SOX14O95416 240 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 TAS2R38P59533 333 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 TMPRSS11AQ6ZMR5 421 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 OR52E1Q8NGJ3 308 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 LGR4Q9BXB1 951 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 TMEM121BQ9BXQ6 578 aaPredicted RBP15.42■□□□□ 0.06
CTCF-201ENST00000264010 OR2B2Q9GZK3 357 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 FBRSQ9HAH7 460 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 NMNAT1Q9HAN9 279 aaPredicted RBP15.42■□□□□ 0.06
CTCF-201ENST00000264010 LYARQ9NX58 379 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms