RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ARHGAP40Q5TG30 622 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 PATL1Q86TB9 770 aaKnown RBP21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 ANKFN1Q8N957 763 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 KLHL4Q9C0H6 718 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 CXorf21Q9HAI6 301 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 ADPRHL2Q9NX46 363 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 OR2W5A6NFC9 320 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 M0QX08 132 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 AGRPO00253 132 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 PGM3O95394 542 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 MAGEA2P43356 314 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 STT3AP46977 705 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 FUT5Q11128 374 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 BIKQ13323 160 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 PWWP2BQ6NUJ5 590 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 CDC73Q6P1J9 531 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 BPHLQ86WA6 291 aaPredicted RBP21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 BMPERQ8N8U9 685 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 AGBL5Q8NDL9 886 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 DOK4Q8TEW6 326 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 OTUB1Q96FW1 271 aaPredicted RBP21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 CENPNQ96H22 339 aaPredicted RBP21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 HSH2DQ96JZ2 352 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 YIPF2Q9BWQ6 316 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 NECTIN3Q9NQS3 549 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 ZNF639Q9UID6 485 aa21.4■■□□□ 1.02
SMARCB1-201ENST00000263121 FAM149AA5PLN7 773 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 TMEM247A6NEH6 219 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 SUV39H1O43463 412 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 SCRG1O75711 98 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 FGF5P12034 268 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 SELENOWP63302 87 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 SERTAD2Q14140 314 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 SYPL1Q16563 259 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 RPS26P11Q5JNZ5 115 aaPredicted RBP21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 QSOX2Q6ZRP7 698 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 VTCN1Q7Z7D3 282 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 PPP1R3BQ86XI6 285 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 SLC44A2Q8IWA5 706 aaPredicted RBP21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 GALNT12Q8IXK2 581 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 VWA5B2Q8N398 1253 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 SLC38A9Q8NBW4 561 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 CATSPER1Q8NEC5 780 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 RBM18Q96H35 190 aaKnown RBP21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 DGAT2Q96PD7 388 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 KCNE3Q9Y6H6 103 aa21.39■■□□□ 1.01
SMARCB1-201ENST00000263121 EFCAB7A8K855 629 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 SLC28A2O43868 658 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 NME6O75414 186 aaPredicted RBP21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 LDLRP01130 860 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 OPN1SWP03999 348 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 S1PR1P21453 382 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 GALNSP34059 522 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 IL11RAQ14626 422 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 CSRP2Q16527 193 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 GRAMD1BQ3KR37 738 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 COX15Q7KZN9 410 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 RIT1Q92963 219 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 PRRX2Q99811 253 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 PELOQ9BRX2 385 aaKnown RBP21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 DOHHQ9BU89 302 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 SLC7A5P2Q9GIP4 190 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 APMAPQ9HDC9 416 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 MKKSQ9NPJ1 570 aaPredicted RBP21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 SLC22A11Q9NSA0 550 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 FER1L5A0AVI2 2057 aa21.38■■□□□ 1.01
SMARCB1-201ENST00000263121 IGKV3D-11A0A0A0MRZ8 115 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 CLOCKO15516 846 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 PRSS23O95084 383 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 CBX7O95931 251 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 IFNA14P01570 189 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 NR2F1P10589 423 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 KCNJ10P78508 379 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 IZUMO2Q6UXV1 221 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 SLC16A11Q8NCK7 471 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 SLC35A4Q96G79 324 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 TREX2Q9BQ50 279 aaPredicted RBP21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 RUBCNLQ9H714 662 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 BCL2L10Q9HD36 194 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 ADAP2Q9NPF8 381 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 IL1RAPQ9NPH3 570 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 C15orf41Q9Y2V0 281 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 DTNAQ9Y4J8 743 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 LRRC42Q9Y546 428 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 DUXAA6NLW8 204 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 LRP3O75074 770 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 DEAF1O75398 565 aaPredicted RBP21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 PDE9AO76083 593 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 HBQ1P09105 142 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 ATXN8OSP0DMR3 200 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 CCKBRP32239 447 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 CRISP3P54108 245 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 RHAGQ02094 409 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 DUSP8Q13202 625 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 GNA13Q14344 377 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 EXOSC7Q15024 291 aaKnown RBP21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 PRAMEF8Q5VWM4 474 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 PRAMEF7Q5VXH5 474 aa21.37■■□□□ 1.01
SMARCB1-201ENST00000263121 HEPHL1Q6MZM0 1159 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms