RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 HOXD8P13378 290 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 FDXRP22570 491 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 DNAJB1P25685 340 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PRKXP51817 358 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 SMN1Q16637 294 aaKnown RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 SIAH1Q8IUQ4 282 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 VWA5B2Q8N398 1253 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 RNF175Q8N4F7 328 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 OR4K14Q8NGD5 310 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 OR10T2Q8NGX3 314 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 MMABQ96EY8 250 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 TMEM19Q96HH6 336 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PSKH2Q96QS6 385 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 KLHL9Q9P2J3 617 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 CSNK1G3Q9Y6M4 447 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 LEFTY2O00292 366 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 AHSA1O95433 338 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 IL33O95760 270 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PAHP00439 452 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 BMP2P12643 396 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PLGLB1Q02325 96 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 GRIK2Q13002 908 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PIN1Q13526 163 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 PCGF3Q3KNV8 242 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 LIPJQ5W064 366 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 ZC3H14Q6PJT7 736 aaKnown RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 NRMQ8IXM6 262 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMG6-201ENST00000263073 PAPD5Q8NDF8 572 aaKnown RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 FAM83FQ8NEG4 500 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 OR8J1Q8NGP2 316 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 OR8K5Q8NH50 307 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 BBS10Q8TAM1 723 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 HYLS1Q96M11 299 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMG6-201ENST00000263073 IFT52Q9Y366 437 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 C2orf78A6NCI8 922 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 SMLR1H3BR10 107 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PPP1R3DO95685 299 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PTTG1O95997 202 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 CSTAP01040 98 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 C1GALT1C1LP0DN25 315 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 CAMLGP49069 296 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 HOXC5Q00444 222 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 Q6ZPB1 254 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 TMEM135Q86UB9 458 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 NPRL2Q8WTW4 380 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 FUBP1Q96AE4 644 aaKnown RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 PCYT2Q99447 389 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 POPDC3Q9HBV1 291 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 TMEM184CQ9NVA4 438 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PCDHGB5Q9Y5G0 923 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 MYH10P35580 1976 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 AKAP12Q02952 1782 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 COL14A1Q05707 1796 aaKnown RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 PAK4O96013 591 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 KNG1P01042 644 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 TNFP01375 233 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 SLC2A5P22732 501 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 CD68P34810 354 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 KCNJ5P48544 419 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 NRIP1P48552 1158 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 LY6G5CQ5SRR4 150 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 WDR53Q7Z5U6 358 aaPredicted RBP11.5□□□□□ -0.57
SMG6-201ENST00000263073 ARL14Q8N4G2 192 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 LMX1AQ8TE12 382 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 OR5P2Q8WZ92 322 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 SAMD8Q96LT4 415 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 STRA6Q9BX79 667 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 RXFP3Q9NSD7 469 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PCTPQ9UKL6 214 aa11.5□□□□□ -0.57
SMG6-201ENST00000263073 PIK3C2AO00443 1686 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 ADORA3P0DMS8 318 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 LEG1Q6P5S2 330 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 DCUN1D3Q8IWE4 304 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 B3GNT7Q8NFL0 401 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 RANGRFQ9HD47 186 aaPredicted RBP11.49□□□□□ -0.57
SMG6-201ENST00000263073 LSM5Q9Y4Y9 91 aaKnown RBP11.49□□□□□ -0.57
SMG6-201ENST00000263073 SLIT2O94813 1529 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 TRAV18A0A075B6X5 111 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 INHAP05111 366 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 BCL7AQ4VC05 210 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 FAM86B1Q8N7N1 296 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 FOXN4Q96NZ1 517 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 MROQ9BYG7 248 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 DPH1Q9BZG8 443 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 RPS10P5Q9NQ39 176 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 MYH2Q9UKX2 1941 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 ACPPP15309 386 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 DCTP40126 519 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 TGM4P49221 684 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 MCCD1P59942 119 aaPredicted RBP11.49□□□□□ -0.57
SMG6-201ENST00000263073 GNMTQ14749 295 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 ZNF542PQ5EBM4 170 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 NLGN4XQ8N0W4 816 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 RHEBL1Q8TAI7 183 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 TMEM125Q96AQ2 219 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 AP1S3Q96PC3 154 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 BCL7BQ9BQE9 202 aa11.49□□□□□ -0.57
SMG6-201ENST00000263073 CD300AQ9UGN4 299 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms