RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 SMC6Q96SB8 1091 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 VKORC1Q9BQB6 163 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 NXF5Q9H1B4 397 aaKnown RBP13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 EXO5Q9H790 373 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 NMRK1Q9NWW6 199 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 ALKBH4Q9NXW9 302 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 MAT2BQ9NZL9 334 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 UTS2RQ9UKP6 389 aa13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 CNOT11Q9UKZ1 510 aaKnown RBP13.38□□□□□ -0.27
RBFOX2-201ENST00000262829 GOLGA6L10A6NI86 522 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 LRRC3CA6NJW4 275 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 HNRNPRO43390 633 aaKnown RBP13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 GUCY1B2O75343 617 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 CSNK2A2P19784 350 aaPredicted RBP13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 GPX3P22352 226 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 VSNL1P62760 191 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 ACSM2AQ08AH3 577 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 PMPCAQ10713 525 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 CSTF3Q12996 717 aaKnown RBP13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 ZNF630Q2M218 657 aaPredicted RBP13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 GXYLT1Q4G148 440 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 C6orf163Q5TEZ5 329 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 ACSM2BQ68CK6 577 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 CLEC6AQ6EIG7 209 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 TRILQ7L0X0 811 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 CCDC71Q8IV32 467 aaPredicted RBP13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 MCEMP1Q8IX19 187 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 TAGAPQ8N103 731 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 VWA5B2Q8N398 1253 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 FBXW8Q8N3Y1 598 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 FAM109AQ8N4B1 249 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 SLC15A4Q8N697 577 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 C7orf57Q8NEG2 295 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 C16orf78Q8WTQ4 265 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 ITPAQ9BY32 194 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 SLC6A15Q9H2J7 730 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 LDAHQ9H6V9 325 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 PLLPQ9Y342 182 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 FIS1Q9Y3D6 152 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 NPFFR2Q9Y5X5 522 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 ZNF780BQ9Y6R6 833 aa13.37□□□□□ -0.27
RBFOX2-201ENST00000262829 COPEO14579 308 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 CLDN14O95500 239 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 CPA3P15088 417 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 ENDOUP21128 410 aaKnown RBP13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 CRHR1P34998 444 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 KIR3DL1P43629 444 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 CCT5P48643 541 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 PKNOX1P55347 436 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 SLC10A1Q14973 349 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 NTRK2Q16620 822 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 CFAP157Q5JU67 520 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 OR52R1Q8NGF1 315 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 OR9A2Q8NGT5 310 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 ZNF681Q96N22 645 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 RILPQ96NA2 401 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 DOHHQ9BU89 302 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 FAIM2Q9BWQ8 316 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 UCK2Q9BZX2 261 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 SPRR3Q9UBC9 169 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 MCM8Q9UJA3 840 aa13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 KLF2Q9Y5W3 355 aaPredicted RBP13.36□□□□□ -0.27
RBFOX2-201ENST00000262829 POLQO75417 2590 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 NKX2-6A6NCS4 301 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 CRCPO75575 148 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 CBX7O95931 251 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 ATP1B1P05026 303 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 ENO1P06733 434 aaKnown RBP13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 ANXA4P09525 319 aaPredicted RBP13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 HSD3B1P14060 373 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 HSD3B2P26439 372 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 ABCD3P28288 659 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 TNFRSF8P28908 595 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 RGS9BPQ6ZS82 235 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 FRMD7Q6ZUT3 714 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 C10orf107Q8IVU9 208 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 LRRC25Q8N386 305 aaPredicted RBP13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 GBP7Q8N8V2 638 aaPredicted RBP13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 EIF1ADQ8N9N8 165 aaKnown RBP13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 OR7G1Q8NGA0 311 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 GNRHR2Q96P88 292 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 ZNF703Q9H7S9 590 aaPredicted RBP13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 ZFP64Q9NPA5 681 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 OXSMQ9NWU1 459 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 CNIH4Q9P003 139 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 ACAD8Q9UKU7 415 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 PSME2Q9UL46 239 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 GRID1Q9ULK0 1009 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 POLR3HQ9Y535 204 aaPredicted RBP13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 EXPH5Q8NEV8 1989 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 MED12Q93074 2177 aa13.35□□□□□ -0.27
RBFOX2-201ENST00000262829 FAM90A27PA6NNH2 459 aa13.34□□□□□ -0.27
RBFOX2-201ENST00000262829 SPAG7O75391 227 aa13.34□□□□□ -0.27
RBFOX2-201ENST00000262829 TRAPPC6AO75865 159 aa13.34□□□□□ -0.27
RBFOX2-201ENST00000262829 IGHG3P01860 377 aa13.34□□□□□ -0.27
RBFOX2-201ENST00000262829 GDF1P27539 372 aa13.34□□□□□ -0.27
RBFOX2-201ENST00000262829 TIA1P31483 386 aaKnown RBP eCLIP13.34□□□□□ -0.27
RBFOX2-201ENST00000262829 MAN2A2P49641 1150 aa13.34□□□□□ -0.27
RBFOX2-201ENST00000262829 NUP107P57740 925 aa13.34□□□□□ -0.27
RBFOX2-201ENST00000262829 MAP4K2Q12851 820 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms