RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 H0Y3Z8 333 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 SYT5O00445 386 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 TRIM3O75382 744 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 ERN1O75460 977 aaKnown RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 REM1O75628 298 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 PPM1BO75688 479 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 KRT6AP02538 564 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 ALDOAP04075 364 aaKnown RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 KRT6BP04259 564 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 CT62P0C5K7 136 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 COL6A2P12110 1019 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 TSPAN8P19075 237 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 CNTFP26441 200 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 ABCD3P28288 659 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 HMOX2P30519 316 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 OPRM1P35372 400 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 CASP3P42574 277 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 KRT6CP48668 564 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 IST1P53990 364 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 DLX5P56178 289 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 WNT3P56703 355 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 DCAF7P61962 342 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 SRYQ05066 204 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 FUT7Q11130 342 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 ERCC6LQ2NKX8 1250 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 FLYWCH1Q4VC44 716 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 EIPR1Q53HC9 387 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 WIPI1Q5MNZ9 446 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 SLC30A6Q6NXT4 461 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 ADGRD1Q6QNK2 874 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 SCIMPQ6UWF3 145 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 ENPP6Q6UWR7 440 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 NUP54Q7Z3B4 507 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 COMMD6Q7Z4G1 85 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 YRDCQ86U90 279 aaKnown RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 MNS1Q8NEH6 495 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 RDH11Q8TC12 318 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 FAM222BQ8WU58 562 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 NINJ1Q92982 152 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 TMCO6Q96DC7 493 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 OMA1Q96E52 524 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 LCORQ96JN0 433 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 NSUN5Q96P11 429 aaKnown RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 PAFAH2Q99487 392 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 FMO2Q99518 471 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 MRPL57Q9BQC6 102 aaKnown RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 OSBPL11Q9BXB4 747 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 ZNF717Q9BY31 904 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 MRPL46Q9H2W6 279 aaKnown RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 CCM2LQ9NUG4 571 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 ZNF629Q9UEG4 869 aaPredicted RBP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 PCTPQ9UKL6 214 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 MAPRE3Q9UPY8 281 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 PCDHA9Q9Y5H5 950 aa11.21□□□□□ -0.61
TRAF4-202ENST00000262396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRAF4-202ENST00000262396 F8P00451 2351 aa11.21□□□□□ -0.62
TRAF4-202ENST00000262396 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 A0A087WUV0 522 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-202ENST00000262396 GNG14A0A1W2PPG7 69 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 A0A1W2PS29 197 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 CCDC151A5D8V7 595 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 TRIM49D1C9J1S8 452 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 CASKO14936 926 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 ACOX3O15254 700 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 CTAG2O75638 210 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 BCAS2O75934 225 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-202ENST00000262396 SUPT7LO94864 414 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 PDYNP01213 254 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 HPNP05981 417 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 NAGAP17050 411 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 TACR1P25103 407 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 CTSSP25774 331 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 IL12BP29460 328 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 TIMP3P35625 211 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 AGFG1P52594 562 aaKnown RBP11.2□□□□□ -0.62
TRAF4-202ENST00000262396 CDH13P55290 713 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 CRYZQ08257 329 aaKnown RBP11.2□□□□□ -0.62
TRAF4-202ENST00000262396 EXOSC7Q15024 291 aaKnown RBP11.2□□□□□ -0.62
TRAF4-202ENST00000262396 TESK1Q15569 626 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 CEBPEQ15744 281 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 TIGD3Q6B0B8 471 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 SLC48A1Q6P1K1 146 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 FAM111BQ6SJ93 734 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 P4HA3Q7Z4N8 544 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 METTL4Q8N3J2 472 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 ZNF615Q8N8J6 731 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 C17orf47Q8NEP4 570 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 OR52R1Q8NGF1 315 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 TRPC4APQ8TEL6 797 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 SLC44A1Q8WWI5 657 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 TMEM41AQ96HV5 264 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 GPR78Q96P69 363 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 ITPAQ9BY32 194 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 UGT2B28Q9BY64 529 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 NXF5Q9H1B4 397 aaKnown RBP11.2□□□□□ -0.62
TRAF4-202ENST00000262396 CDC42EP4Q9H3Q1 356 aaKnown RBP11.2□□□□□ -0.62
TRAF4-202ENST00000262396 PROK2Q9HC23 129 aa11.2□□□□□ -0.62
TRAF4-202ENST00000262396 EHD3Q9NZN3 535 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms