RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 SNRNP27Q8WVK2 155 aaKnown RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 PPWD1Q96BP3 646 aaKnown RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 PHF12Q96QT6 1004 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 SPAG4Q9NPE6 437 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.3■□□□□ 0.68
RTCA-201ENST00000260563 VPS4AQ9UN37 437 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 DOCK10Q96BY6 2186 aa19.3■□□□□ 0.68
RTCA-201ENST00000260563 LOC400499M0QZD8 3231 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 MED13Q9UHV7 2174 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 C15orf38-AP3S2A0A0A6YYH1 394 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 ANKRD65E5RJM6 399 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 ATP1B1P05026 303 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 ZCCHC18P0CG32 403 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 NT5EP21589 574 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 SLC6A2P23975 617 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 GALNSP34059 522 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 EXT1Q16394 746 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 RUNDC3AQ59EK9 446 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 CPZQ66K79 652 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 NANOGP8Q6NSW7 305 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 BNC2Q6ZN30 1099 aaPredicted RBP19.29■□□□□ 0.68
RTCA-201ENST00000260563 ARPINQ7Z6K5 226 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 TRIML2Q8N7C3 387 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 CLEC1AQ8NC01 280 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 RIT1Q92963 219 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 MCUR1Q96AQ8 359 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 ANKRD27Q96NW4 1050 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 THTPAQ9BU02 230 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 NANOGQ9H9S0 305 aa19.29■□□□□ 0.68
RTCA-201ENST00000260563 PRPF19Q9UMS4 504 aaKnown RBP19.29■□□□□ 0.68
RTCA-201ENST00000260563 GPC1P35052 558 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 PGDP52209 483 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 SLC26A5P58743 744 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 BTBD16Q32M84 506 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 GALNT12Q8IXK2 581 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 B3GNT7Q8NFL0 401 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 OR8J3Q8NGG0 315 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 PSMA8Q8TAA3 256 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 PTPMT1Q8WUK0 201 aaPredicted RBP19.28■□□□□ 0.68
RTCA-201ENST00000260563 ART5Q96L15 291 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 CDRT15Q96T59 188 aa19.28■□□□□ 0.68
RTCA-201ENST00000260563 ICAM2P13598 275 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 PGM1P36871 562 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 CDK9P50750 372 aaKnown RBP19.27■□□□□ 0.68
RTCA-201ENST00000260563 SLC7A2P52569 658 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 KCNJ2P63252 427 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 AIMP2Q13155 320 aaKnown RBP19.27■□□□□ 0.68
RTCA-201ENST00000260563 GAB1Q13480 694 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 PLAG1Q6DJT9 500 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 DGAT2L6Q6ZPD8 337 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 OR9A2Q8NGT5 310 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 IMMP1LQ96LU5 166 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 CNPPD1Q9BV87 410 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 TRIM8Q9BZR9 551 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 TRIM4Q9C037 500 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 MMADHCQ9H3L0 296 aaPredicted RBP19.27■□□□□ 0.68
RTCA-201ENST00000260563 CXorf36Q9H7Y0 433 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 ATP13A2Q9NQ11 1180 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 SIRT3Q9NTG7 399 aaPredicted RBP19.27■□□□□ 0.68
RTCA-201ENST00000260563 ADA2Q9NZK5 511 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 TMEM181Q9P2C4 612 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 ABCD2Q9UBJ2 740 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 SNX8Q9Y5X2 465 aa19.27■□□□□ 0.68
RTCA-201ENST00000260563 MASP2O00187 686 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 UQCRC2P22695 453 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 SOAT1P35610 550 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 AP2B1P63010 937 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 CHAF1BQ13112 559 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 RABL3Q5HYI8 236 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 SLC15A3Q8IY34 581 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 ARHGAP24Q8N264 748 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 MORN4Q8NDC4 146 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 SLC2A12Q8TD20 617 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 TMEM125Q96AQ2 219 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 AURKBQ96GD4 344 aaPredicted RBP19.26■□□□□ 0.67
RTCA-201ENST00000260563 SH3GL1Q99961 368 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 SLC35A5Q9BS91 424 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 OR8D2Q9GZM6 311 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 ING2Q9H160 280 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 CXorf21Q9HAI6 301 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 CMTM6Q9NX76 183 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 COPS7AQ9UBW8 275 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 L3MBTL1Q9Y468 752 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 KCNMB2Q9Y691 235 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 CPAMD8Q8IZJ3 1885 aa19.26■□□□□ 0.67
RTCA-201ENST00000260563 CFAP73A6NFT4 308 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 PTGER1P34995 402 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 MTPNP58546 118 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 SELPLGQ14242 412 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 LTB4RQ15722 352 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 PRICKLE4Q2TBC4 344 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 KBTBD2Q8IY47 623 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 CLEC4FQ8N1N0 589 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 NFAM1Q8NET5 270 aaPredicted RBP19.25■□□□□ 0.67
RTCA-201ENST00000260563 ADCY4Q8NFM4 1077 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 M1APQ8TC57 530 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 ZNF675Q8TD23 568 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 ZFP90Q8TF47 636 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 NCLNQ969V3 563 aa19.25■□□□□ 0.67
RTCA-201ENST00000260563 VMP1Q96GC9 406 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms